Pseudomonas tolaasii: I7845_21140
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Entry
I7845_21140 CDS
T08975
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol00521
Streptomycin biosynthesis
ptol00523
Polyketide sugar unit biosynthesis
ptol00525
Acarbose and validamycin biosynthesis
ptol00541
Biosynthesis of various nucleotide sugars
ptol01100
Metabolic pathways
ptol01110
Biosynthesis of secondary metabolites
ptol01250
Biosynthesis of nucleotide sugars
Module
ptol_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
I7845_21140 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
I7845_21140 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
I7845_21140 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
I7845_21140 (rfbB)
00525 Acarbose and validamycin biosynthesis
I7845_21140 (rfbB)
Enzymes [BR:
ptol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
I7845_21140 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QXQ17378
LinkDB
All DBs
Position
complement(4769789..4770859)
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AA seq
356 aa
AA seq
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MTILVTGGAGFIGANFVLDWVAQADEPVINLDKLTYAGNLDNLSSLEGDKRHVFVHGDIA
DSQLVQRLLAQYQPRAILNFAAESHVDRSIHGPEDFIETNVVGTFRLLEAVRAYWKGLDA
GAGQAFRFLHVSTDEVYGSLAKDDPAFTENHQYEPNSPYSASKAASDHLVRAYHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVKDHCSAIRRVLE
AGTVGEVYNVGGWNEKPNLDIVHTVCALLDELRPKADGKPYSEQIAYVTDRPGHDRRYAI
DARKLERELGWKPAETFETGIRKTVEWYLDNQAWVSNIQSGSYREWVEKNYAGRSA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgactatcttagtaaccggcggcgctggctttatcggtgcaaactttgtattggactgg
gtagcacaggcggatgagccggtcattaacctggataagctgacgtacgccggtaacctg
gataacctcagctcgctcgagggcgacaaacgccacgtatttgtgcatggcgatattgcc
gatagccagttggttcagcgtttgctcgcgcaataccagccgcgcgccatcctgaatttc
gctgccgagtctcatgttgatcgctccattcacggtcctgaagacttcattgagaccaac
gtcgtaggcaccttccgtttgctggaagccgtgcgtgcgtattggaaggggctggatgca
ggcgcgggtcaggcttttcgttttctgcacgtgtccaccgacgaagtctacggctcgctc
gccaaagacgatcctgcgttcaccgaaaaccatcagtacgagcccaacagcccgtactcg
gccagcaaggctgccagcgatcacttggtgcgcgcctaccatcacacctatggcctgccg
gtactgaccaccaactgctcgaacaactacggtccgtatcactttcccgaaaaactgatt
ccgttgatgatcgttaacgcactggccggtaaagcgctgccggtgtatggcgatggtcag
caaattcgtgactggctgtacgtaaaagatcactgcagcgcaatccgtcgtgtgctggaa
gcgggcacggtgggcgaggtctataacgtgggtggctggaatgaaaagccaaacctggac
atcgtgcacaccgtttgtgcgctgctcgatgaactgcgccccaaggcagatggcaaacct
tacagcgagcagatcgcctacgtgaccgaccgccccgggcatgaccgccgttacgccatc
gacgctcgtaaactggagcgtgagttgggctggaagcctgccgagaccttcgagaccggt
atccgcaagacagtagagtggtacctggacaaccaggcttgggtcagcaatattcagtcc
ggttcctatcgtgaatgggtagaaaagaattacgccgggcgctcggcatga
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