Pseudomonas tolaasii: I7845_24560
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Entry
I7845_24560 CDS
T08975
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I7845_24560 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptol03400
]
I7845_24560 (recC)
Enzymes [BR:
ptol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I7845_24560 (recC)
DNA repair and recombination proteins [BR:
ptol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I7845_24560 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QXQ18023
LinkDB
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Position
complement(5510575..5514027)
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AA seq
1150 aa
AA seq
DB search
MPDATSLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEEDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGKDEIPQKSLLDKAPLTWRLMRLLPEL
INQPHFEPLQRFLTDDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGE
SKPLNPANCWQAELWRALLLDVGEEGMAESRAGVHQRFIERINTVEQAPHGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKAGMPVTI
DPQTLHQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSDSEPTTLLNQL
QDDILELRPLNETRELWPAVDLGRDTSIRFHIAHSAQREVEILHDQLLQRFSADPTLRPR
DIIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPSELEQNS
WRFGLRRMLLGYAVGTGIACDGIEPYDEIGGLDAALIGPLVALLDALNDAHQALSQPATP
PEWGERLQRLMQLFFLPSSEHDDYLLSQLEQLRETWLETCESVGLQDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSDRPASVLIGQLRDHLASGWHNAD
TEVPLLDAMTQEHPLQPFSARYFHEGDPLFSYAREWQLLHEATDAPATERELAQHQQEEP
LTLGQLQDFLRNPVKHFFSQRLKVFFEPAEVPLADKEPFVLDALQRYSLSDSLLNAALAQ
PGHIDQALNAQALRLQGSGLLPMVGFGECLRNELVEPLPDLLQRYQQLLALWPTPHPAAE
PINFEHQGIQLEGWISGLHRRSDGGLLSVTTIPNSIGSIKTRKWHRLIRPWVNHVVACAC
GLQLSTGLVASDDTLLLAPLDKSSAEEILGNLLLAWHAGMRKPLPVAVKTAFAWLGQTDP
AKAQAAASKAYEGDGINTDGERRETPALTRQFPDYATLIASEEFEGWAETLYRPLINASW
RSLSGEEASA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgcgacgtccctcagcgctggattcatggtggttcacggcaaccgcctggac
gaactgcgcagcctggtggtcagttggatgcgccgctatccactggcgcctttggaaaat
gaaatcgctttggtacaaagcaacggtatcgcccagtggctaaaattggccttggccgaa
gatcctgaagaggatgacatgggcggctgcggtatcgcggcagcaatcgacgtgcaactg
cccggcagtttcatgtggcagctctaccgcatggttttgggcaaagatgaaattccgcaa
aagtccctgctcgacaaagctccgctgacctggcgcctgatgcgtttgcttccggagctt
atcaaccaaccgcactttgagccgctgcaacgcttcctcaccgacgacaccgacctgcgt
aaacgctaccaactcgccgaacgcctggccgatctgttcgaccaatatcaggtctatcgc
gccgactggctcgaagactgggccgcaggccgccaccaactacgcaatggtcgtggtgag
tccaagccgctgaaccctgccaactgctggcaagccgaattgtggcgcgcactgctgttg
gatgtaggtgaagagggcatggccgaaagccgcgccggcgttcaccagcgcttcatcgag
cgcattaacaccgttgagcaagccccccatggcttgccgtcccgggtgatcgttttcggt
atttcttcgttgcctgcgcaagcactggaagcactcgccggcctggcgcgtttcagtcag
gtcctgctctgtgtacacaacccttgccgtcaccattggtccgacatcgtcgccgacaaa
gatttgctgcgtaacgaatacaagcgtcaggcgcgcaaggctggcatgccggtcaccatc
gacccgcaaaccctgcaccaacatgcccacccgctgttggcggcctggggtaaacagggc
cgcgactacatcagcctgctggacagttacgacgaccccaacagctaccgcgccgccttc
cgcgatggccgcatcgacctgttcagcgacagcgagcccaccacgctgctcaaccaactg
caggacgacatcctcgaacttcgcccgctcaacgaaacccgtgagctatggcctgcagtg
gatctggggcgtgacacctcaatccgcttccacatcgcccacagcgcccaacgcgaagtg
gaaatcctccacgatcaactgctccagcgcttcagtgccgaccccacactgcgcccgcgc
gacatcatcgtcatggtccccgacgtcgacagctacgcgccgcacatccgcgccgtgttc
ggccagcttgagcgaaatgatccgcgcttcatcccgtttaccctcaccgatcaaggccaa
cgcggccgtgacccgctgttgatcgccgtcgagcacctgctgaaactcccggacagccgc
tttcccgtgagcgaaattctcgacctgctcgacgttcccgctctgcgtgaacgcttcgcc
atcaaggaacgcgacctgccgacgctgcaccgctggatcgaaggcgccggcatccgctgg
ggcctcaacgccgaacagcgtgcaggccttggcctgccaagtgagctggaacaaaacagc
tggcgatttggcctgcgccgcatgctgctgggttatgccgttggcaccggtattgcgtgc
gacggcattgagccctacgacgaaattggtggtctcgacgctgccctcatcggcccgttg
gttgctttgctggacgcgctaaacgacgcgcatcaggcgttgtcacaaccggcaacacca
ccggaatggggcgagcgcctgcaacgcctgatgcagttgttcttcttgcccagcagtgag
catgacgattacctgctgagccagctcgaacaactcagggaaacctggctggaaacctgc
gagtccgtcgggctgcaggatgagttaccgctcaccgtagtccgcgaagcctggttggcc
ggtttggaccaggggcgactgtcccagcgctttttggcaggagctgtcaatttctgtact
ttgatgcccatgcgcgccatcccgttcaagctcgtttgcctgctcggcatgaacgacggc
gactatccgcgcgcgcaacccccgctggacttcgacctgatgggcagcgactaccggccc
ggcgaccgctcgcgccgtgaagacgaccgctacctgctgctcgaagccctgctgtccgcc
cgcgaccagctctatatcagctgggtgggccgcagcattcgcgacaacagtgaccgaccc
gcctcggtattgatcggccaactgcgcgaccacctcgccagcggctggcacaacgcagac
acagaggtacccttgctggacgcgatgacccaggaacatccgctccagccgttcagcgcg
cgctattttcacgaaggcgacccgttgttcagctacgcccgcgaatggcagttactgcat
gaagcgacggacgccccagcaacagaacgcgagctggcacagcatcagcaagaagaaccc
ctgaccctcggccagttgcaggatttcctgcgcaacccggtcaagcacttcttcagccag
cgcctgaaagtgttcttcgaacccgccgaagtgccgctcgccgataaagagcccttcgtc
ctcgacgcgcttcaacgctacagcctcagcgacagcctgctcaacgctgcactggctcaa
cccggtcacattgatcaggccctcaacgcccaggccctccgtctgcaaggcagtgggctg
ctgcctatggtgggtttcggcgaatgcctgcgcaatgagctggtcgagccgctgcccgat
ctgttgcaacgttatcaacaactactcgcgctgtggccaacgccacatcccgcagcagaa
ccgatcaattttgagcatcaaggcatccagctggagggttggatcagcggtttgcatcga
cgcagtgatggcggattgttgagcgtcaccaccatccccaacagcatcggctcgatcaaa
acgcgcaagtggcatcgcctgatccgtccctgggtcaaccacgtagtagcgtgtgcctgt
ggcctgcaactcagcaccggtctggttgccagcgacgacaccttgctattggcgccgctg
gataagtccagcgccgaggaaatccttggcaacttgctcctggcctggcacgccggtatg
cgcaaaccgctgcccgtcgcggtcaaaaccgccttcgcctggctcggccaaaccgacccc
gccaaggcgcaggccgccgcgagcaaggcttacgagggtgacggcatcaacaccgatggt
gaacgccgtgaaaccccggcgctcactcgccagttcccggactacgccacgctcatcgcc
agcgaagaattcgaaggctgggccgaaaccctgtatcgaccgctgatcaatgcatcctgg
cgatcactcagcggcgaggaggccagcgcatga
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