Pseudomonas tolaasii: I7845_24750
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Entry
I7845_24750 CDS
T08975
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I7845_24750 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptol03019
]
I7845_24750 (pnp)
03016 Transfer RNA biogenesis [BR:
ptol03016
]
I7845_24750 (pnp)
Enzymes [BR:
ptol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
I7845_24750 (pnp)
Messenger RNA biogenesis [BR:
ptol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I7845_24750 (pnp)
Transfer RNA biogenesis [BR:
ptol03016
]
Prokaryotic type
tRNA degradation factors
I7845_24750 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QXQ18055
LinkDB
All DBs
Position
complement(5557897..5560002)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVTVVGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIKAVTELAAEAAKPTWTWAPQAEA
TELLGAIRSEFGAAISDAYTITVKADRYARLGELKDQVVAKLSGEEGQPSSSDVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggttatcaaaaaattccagttcggtcagtcgaccgttaccctcgagacaggc
cgtatcgcccgtcaagcctccggcgcagtgctggtcaccgttgacgacgacgttaccgtt
ctggtgaccgtggttggcgccaagaccgctgacccgagcaaaggcttcttccctctgtcc
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgc
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccggaaggcttcatgaacgaagtgcaggtagtctgcaccgtcgtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tccggcattcctttcgatggcccgatcggcgctgcccgtgttgcgttccacgaaagcacc
ggctacctgctgaacccgacttacgagcaactgaaagcatcgagcctggacatggtcgtt
gccggtacctcggaagccgtattgatggttgagtcggaagccaaagagctgaccgaagac
cagatgctgggcgccgtactgttcgcccacgacgagttccaggctgttatcaaggctgtc
accgaactcgctgccgaagccgccaagccaacctggacctgggctccgcaagctgaagcg
accgaactgctgggcgcaatccgctccgagttcggcgctgccatctccgacgcctacacc
atcaccgtcaaggccgaccgttacgctcgcctgggcgagctgaaggatcaggttgtggcc
aagctgtccggtgaagaaggccaaccttcctccagcgacgtcaaagcggctttcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggtcgc
gacacccgcaccgtgcgccctctgaacatcgaagtcggcgttctgccgaagactcacggt
tcggcgctgttcacccgtggtgaaacccaggccctggtcgtcgcgaccctgggcaccgcc
cgtgacgcacaactgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggtggcgctggccgccgc
gaaatcggtcacggccgtctggcccgccgttcggtacaggccatgctgcctgctgctgac
gtgttcccgtacaccatccgtgtcgtgtcggaaatcaccgagtccaacggttccagctcc
atggcttccgtttgcggtgcttccctggcactgatggacgccggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggtctggttaaagaaggcgagaagttcgccatcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtagccggtaccgcc
aaaggcgtgaccgcgctgcagatggacatcaagatcaagggcatcaccgaagaaatcatg
gaaatcgctctgggccaagccctggaagcgcgcctgaacatcctcggtcagatgaaccag
atcatcggtcagtcccgtaccgagctgtcggaaaatgctccgaccatgatcgcgatgaaa
atcgacaccgacaaaatccgtgatgttatcggtaaaggcggcgcgaccatccgtgcgatc
tgcgaagagaccaaggcctcgatcgacatcgaagacgatggttcgatcaagatcttcggc
gaaaccaaggaagcggctgaagctgctcgtcagcgcgttctgggtatcaccgctgaggcc
gagatcggcaagatctacgtcggtaaggttgagcgcatcgtcgacttcggcgcgttcgtc
aacatcctgccgggcaaagacggtctggtgcacatctccatgctgagcgacgctcgcgtt
gagaaagtgaccgacattctgaaagaaggccaggaagtggaagtgctggtactggacgtg
gacaaccgcggccgtatcaaactgtccatcaaggacgtagcagcagccaaggcttcgggc
gtttaa
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