Pseudomonas tolaasii: I7845_24760
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Entry
I7845_24760 CDS
T08975
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ptol
Pseudomonas tolaasii
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptol03016
]
I7845_24760 (truB)
Enzymes [BR:
ptol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
I7845_24760 (truB)
Transfer RNA biogenesis [BR:
ptol03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I7845_24760 (truB)
Prokaryotic type
I7845_24760 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QXQ18057
LinkDB
All DBs
Position
complement(5560584..5561501)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPIGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLQVRDVTVGRADIEAVLPAFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTIARLELLASEGDTARLSVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgcaatgtcagcggcatcattctgctcgacaagccc
attggttttacctccaatgccgcgttgcagaaggtccgctggctgctcaatgccgagaag
gcagggcacaccggcagcctcgaccccctggccaccggcgtgttgccgttgtgctttggc
gaggccaccaagttctcgcaatacctgctcgattccgacaagggttacgaaaccctcatg
caactgggcaagaccaccaccacggccgacgccgaaggtgacgttttgcaggttcgcgac
gtgaccgttggtcgtgctgatatcgaagccgttttacccgcttttcgcgggcaaatcagt
cagataccgccgatgtactcggcgctcaagcgtgatggccagcctctttacaagctggcg
cgtgccggtgaagtagtggagcgtgaagcgcgttctgttactattgcgcggcttgaattg
ctcgccagtgaaggcgacaccgcgcgattgtcggtggactgcagcaaaggcacctatatt
cgtaccctggtggaagatattggtgagcaactgggctgtggtgcatacgttgcagaactg
cgacgtactcaagccggacctttcaccctggctcagacggtcacgctggaagagttggaa
gcggtacacgccgaaggcggcaatgaagcggttgatcgcttcctgatgccatcggacagc
ggtttgctcgactggccattgctgcatttttcggagcacagcgcgttctactggctcaac
ggccagccggtacgtgccccggacgctccgaagttcggcatggtgcgggtacaggatcat
aatggtcgcttcatcgggatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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