Pseudomonas tolaasii: I7845_26505
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Entry
I7845_26505 CDS
T08975
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I7845_26505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptol03021
]
I7845_26505
Transcription machinery [BR:
ptol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I7845_26505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
Sigma70_ECF
HTH_24
HTH_17
HTH_29
Peripla_BP_3
Sigma70_r3
MerR
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QXQ18381
LinkDB
All DBs
Position
5932810..5933328
Genome browser
AA seq
172 aa
AA seq
DB search
MSSVQTPHSELVGALYRDHRGWLLAWLRRNVACPSRAEDLSQDTFMRLLGRDELREPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPESEHPSPEEQQLILEDLKAIDRLLGKL
SSKARAAFLYNRLDGLGHAEIAQRLGVSVPRVRQYLAQGIRQCYIALYGEPL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtcggtccagaccccacacagtgagctagttggcgcgttgtatcgcgaccatcgt
ggctggctgctggcctggctgcggcgcaatgtggcgtgcccgagccgcgccgaggacctg
agccaggacaccttcatgcgcctgctcggccgcgacgagctgcgcgaaccccgcgagcca
cgggcgtttctggtggccatcgccaaaggcctgctgttcgactacttccgtcgcgccgcc
ctggaacaggcctacctcaccgaattgatgctgattccggaaagcgagcacccctcgccg
gaagaacagcaactgatcctcgaagacctgaaggccatcgaccgtctgctcggcaagctc
tcgagcaaggcccgcgcggcgttcctctataaccgcctcgacggcctgggccacgccgaa
atcgctcagcgcctcggcgtgtcggtgccgcgcgtgcgccagtacctggcccagggcatt
cgccagtgctacatcgccctgtatggcgagccgttgtga
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integrated database retrieval system
