Pseudomonas tolaasii: I7845_28030
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Entry
I7845_28030 CDS
T08975
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol00300
Lysine biosynthesis
ptol00470
D-Amino acid metabolism
ptol01100
Metabolic pathways
ptol01110
Biosynthesis of secondary metabolites
ptol01120
Microbial metabolism in diverse environments
ptol01230
Biosynthesis of amino acids
Module
ptol_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I7845_28030 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I7845_28030 (lysA)
Enzymes [BR:
ptol01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
I7845_28030 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QXQ18674
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All DBs
Position
6255148..6256395
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKADKIVFSGVGKNREDMRRALEVGVH
CFNIESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV
GVRYRDEEPPLIADYIHAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMNVTAVTPRASEARAYDIVGPICETGDFLAKDRQLAVEEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggcgtggcgttgtccgcg
attgccgagcgctttggcaccccgacctatgtgtactcccgtgcgcatatcgaagctcaa
taccgttcgttcaccgacgcactcgacggcgtcccgcacctggtgtgctacgcggtcaag
gccaactccaacctgggtgtactgaatgtcctggcgcgtctgggcgccggttttgacatc
gtctcccgtggcgagctggaacgtgtactggccgctggcggcaaggctgacaagatcgtg
ttctccggcgtcggcaagaaccgcgaagacatgcgccgcgccctggaagttggcgtgcat
tgcttcaacatcgaatccaccgacgagctggagcgcctgcaggtcgtggccgccgagatg
ggcgttcgcgcgccgatctccctgcgcgtcaacccggacgtcgacgccggtacccaccct
tacatctccaccggtctcaaagagaacaagttcggcatcgccatcgccgacgccgaggac
gtgtacatccgcgccgcccagttgccaaacctggaagtgctgggtgtggactgccacatc
ggctcgcaactgacgacgctgccgcccttcctggacgccctcgaccgcctgctggcgttg
atcgaccgtcttggcgaatgcggcatctacctgcaccacatcgacctcggtggcggcgtg
ggcgtgcgttatcgcgacgaagagccgccgctgattgccgactacattcatgcggtgcgc
gagcgcatcgaaggccgcgacctgaccctgatgttcgagccgggccgttacatcgtcgcc
aacgccggcgtgctgctgacccaggtcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
aatgtcaccgccgtgacgcctcgcgcaagcgaagcacgcgcctatgacatcgtcggcccg
atctgcgaaaccggcgacttcctggccaaggatcgtcagctggccgtggaagaaggtgac
ctgctggccgtgcattcggccggtgcctatgggtttgtcatgagttccaactacaacacc
cgcggccgtaccgccgaggtgctggtggacggtgatcaagcatttgaagtgcgtcgccgc
gagacggtagccgagttgtatgctggcgaaagcctgctgccggagtaa
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