KEGG   Pseudomonas tolaasii: I7845_28035
Entry
I7845_28035       CDS       T08975                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ptol  Pseudomonas tolaasii
Pathway
ptol00300  Lysine biosynthesis
ptol00470  D-Amino acid metabolism
ptol01100  Metabolic pathways
ptol01110  Biosynthesis of secondary metabolites
ptol01120  Microbial metabolism in diverse environments
ptol01230  Biosynthesis of amino acids
Module
ptol_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ptol00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    I7845_28035 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    I7845_28035 (dapF)
Enzymes [BR:ptol01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     I7845_28035 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: QXQ18675
LinkDB
Position
6256399..6257229
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPSNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGVIELDIRSDGQISVNM
GAPRLVPADIPFQATEQASSYAVDVDGQIVDLAAVSMGNPHAVLRVNDINNAPVHELGPK
IEHHPRFPARVNVGFLQVIDRSRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGHPVLMTGPASRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaaaatgcacgggctggggaatgatttcatggtcctggacctg
gtcagtcagcacgcgcacattcagcccaaacacgccaaacagtggggcgaccgccatacc
ggcattggtttcgaccaattgctgatcgtcgaggcgccgagcaacccggaggtggatttc
cgctaccggatcttcaactccgacggctccgaagtggagcagtgcggcaacggtgcccgc
tgtttcgcccgctttgtgctggacaagcgcctgaccgccaagcggcagatccgcgtcgag
accaagagcggtgtgatcgagctggatatccgcagcgacggccagatcagcgtcaacatg
ggcgcgccacgcctggtgccggcggacatcccgttccaggccaccgagcaggcgtccagc
tacgcggtcgacgtcgacggccagatcgtcgacctggcagcggtctccatgggcaacccc
catgcggtgctgcgggtcaatgacatcaacaacgcccccgtgcatgaactggggccgaag
atcgaacaccacccgcgctttccggcacgggtgaatgtgggcttcctgcaggtgatcgac
cgttcccgcgcgcaactgcgcgtatgggaacgcggcgccggcgaaacccaggcctgcggt
accggcgcatgcgccgctgccgtggccgcgatcagccaggggtggatggattcgcccctg
ctgatcgacctgcccggtggacgcctgtccatcgaatgggcaggccctggccacccggtg
ttgatgaccgggccggcctcgcgtgtatacgaaggacaggtccgtctatga

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