Pseudomonas tolaasii: I7845_28035
Help
Entry
I7845_28035 CDS
T08975
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol00300
Lysine biosynthesis
ptol00470
D-Amino acid metabolism
ptol01100
Metabolic pathways
ptol01110
Biosynthesis of secondary metabolites
ptol01120
Microbial metabolism in diverse environments
ptol01230
Biosynthesis of amino acids
Module
ptol_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I7845_28035 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I7845_28035 (dapF)
Enzymes [BR:
ptol01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
I7845_28035 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QXQ18675
LinkDB
All DBs
Position
6256399..6257229
Genome browser
AA seq
276 aa
AA seq
DB search
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPSNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGVIELDIRSDGQISVNM
GAPRLVPADIPFQATEQASSYAVDVDGQIVDLAAVSMGNPHAVLRVNDINNAPVHELGPK
IEHHPRFPARVNVGFLQVIDRSRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGHPVLMTGPASRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaaaatgcacgggctggggaatgatttcatggtcctggacctg
gtcagtcagcacgcgcacattcagcccaaacacgccaaacagtggggcgaccgccatacc
ggcattggtttcgaccaattgctgatcgtcgaggcgccgagcaacccggaggtggatttc
cgctaccggatcttcaactccgacggctccgaagtggagcagtgcggcaacggtgcccgc
tgtttcgcccgctttgtgctggacaagcgcctgaccgccaagcggcagatccgcgtcgag
accaagagcggtgtgatcgagctggatatccgcagcgacggccagatcagcgtcaacatg
ggcgcgccacgcctggtgccggcggacatcccgttccaggccaccgagcaggcgtccagc
tacgcggtcgacgtcgacggccagatcgtcgacctggcagcggtctccatgggcaacccc
catgcggtgctgcgggtcaatgacatcaacaacgcccccgtgcatgaactggggccgaag
atcgaacaccacccgcgctttccggcacgggtgaatgtgggcttcctgcaggtgatcgac
cgttcccgcgcgcaactgcgcgtatgggaacgcggcgccggcgaaacccaggcctgcggt
accggcgcatgcgccgctgccgtggccgcgatcagccaggggtggatggattcgcccctg
ctgatcgacctgcccggtggacgcctgtccatcgaatgggcaggccctggccacccggtg
ttgatgaccgggccggcctcgcgtgtatacgaaggacaggtccgtctatga
DBGET
integrated database retrieval system