Pseudomonas tolaasii: I7845_28355
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Entry
I7845_28355 CDS
T08975
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol02025
Biofilm formation - Pseudomonas aeruginosa
ptol03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
I7845_28355 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
I7845_28355 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptol02044
]
I7845_28355 (tssM)
Secretion system [BR:
ptol02044
]
Type VI secretion system
Imp/Vas secretion system core components
I7845_28355 (tssM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
T7_gp14
DUF2383
Motif
Other DBs
NCBI-ProteinID:
QXQ18737
LinkDB
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Position
complement(6323275..6326775)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKAFFSFMIRWVIPVLGLIALSLIIWFVGPLLDVLMPEGRRWALIILVFAVWIAYRVFRI
IQAHRQAAEVMRSLAAETPADPNSVATAEELTTLRQRMDEALALLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSNSTVDKAAWLGFLDLLKKQRSRRPIDGAFIAISLSDLLLGTDAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEDRAQVWGMTFALDDGKNSDSP
LAHLQSEFAGLEQRLNERLVERLQQERDPARRDLIYGFPQQFGALKDCLQGFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQSGTGRSYFIEKLFTAV
AFAERGLVGVNPKVERRRKWIARGVLAATVALVVVVSGLWWVSYRANQAYIAQVDQKVAP
LGQAVQTLSPAQRDVLAVLPLLNAVKGLAGDSPSWAEGLGLYQGDMLEAESGSVYRKLLI
AVFAPRLVTRIEEQLHGGGNSDFLYEGLKAYLMLADNEHYDPDFIKAWIALDWDRSLPRD
LPADQRQALTAHLQALFDRHPPNARLDPRLIDDLRRQLQQLPVAQRVYDRVKRQKLPEGI
PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTAKGYRQAFLLSSLNQTGTLAEEQWVL
GHEQADQQNVVSLAGDVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQAEERQLAAKGVPVEGGVDKLKERLGSLLGQEQQAASKPEVADDPV
TAHFAELNSIVSKNEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQAAAAATR
VSLNAERQPPLVQGMVKSVVNSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLAGRYPMAPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSAQTWRWQPGAAQKLGIAPGVLQTFQ
RAATIRDAFFRAGGTQPIVRFELKPVSMDPTITQFLLDLDGQQLSYDHGPSRPVAMQWPN
PGSIGVVRISIMPPSASGRSGVTLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASIA
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagtttcatgattcgctgggtgatccccgtgctgggcctgatcgcg
ctgagcctgatcatctggtttgtcgggccgttgctcgatgtgttgatgccggaagggcgc
cgctgggcgttgatcattctggtgtttgccgtgtggatcgcctaccgcgtgttccgcatc
attcaggcgcaccgtcaggccgccgaagtgatgcgcagcctggcggcggagaccccggcg
gacccgaacagtgtggctacggccgaagaactcaccaccctgcgccagcgcatggacgaa
gccctggcgctgctgaaaaaggccaagctgggcggcgatgagcgccgtaacctctacgag
ctgccgtggtacgtgatcatcggcccgccgggttcgggcaagaccacggcgctggtcaat
tccggcctgcattttccattggctgcgcagctgggcgccggtgccgtgcgcggcgtgggc
ggcacgcgcaattgcgattggtggtttaccgatcaggcggttttgctcgacaccgcaggc
cgctacaccacacaagacagcaactccacagtggataaagccgcgtggctgggctttctc
gacctgttgaaaaaacagcgttcgcgccggcccatcgatggtgcgttcattgccatcagc
ctgtcggacctgctgctcggcaccgatgccgaacgcgccgcccatgccgctgcgatccgc
ctgcgtatccaggagctgtacacccaactgggcgtgcgtttcccgatctacctgatgctc
accaagctcgatctggtgccaggcttcatggagttcttcgacaacctgagcaaggaagac
cgcgcccaggtgtggggcatgacctttgctctggacgacggcaagaacagcgacagccca
ttggcccatctgcaaagcgaattcgccgggctggagcagcgcctcaacgagcgcctggtc
gagcgcctgcaacaggaacgcgacccggcgcggcgcgacctgatctacggcttcccgcag
cagttcggcgcgttgaaagattgtctgcaaggcttcctcgaaggtgtgttcaagcccaat
gcctttgaagagcgcgtgttgctgcgtggtgtgtatttcaccagcggcacccaggaaggc
agcccgattgatcgcctgatcggcgccatggcccagagcatgaacctggaccgccagcac
ctggcgcgccagagcggcaccgggcgcagttacttcattgaaaaactgttcaccgccgtg
gcgtttgccgagcgcgggctggtcggtgtcaatccgaaagtcgagcgtcggcgcaagtgg
attgcacgcggcgtgctggcggctaccgtggcgttggtggtcgtcgtcagcggcctgtgg
tgggtcagttatcgcgccaaccaggcgtacatcgcgcaggtcgatcagaaggtggcgcca
ctcggccaggccgtgcaaaccctgagcccggcgcagcgcgacgtactggccgtgttgccg
ttgctcaacgcggtgaaaggcctggcaggcgactcgccgagctgggccgaaggcctgggc
ctgtatcagggcgatatgctcgaagccgagtccggcagtgtgtaccgcaagctgttgatc
gccgtgttcgcaccacgcctggtgacgcgcatcgaagagcaactgcacggcggcggcaat
tccgacttcctctacgagggcctcaaggcctacctgatgctggcggacaacgagcattac
gacccggacttcatcaaggcgtggattgccctggactgggaccgcagcctgccgcgcgac
ctgcccgccgaccagcgccaggccctgaccgcacacctgcaagccttgttcgaccgccac
ccgccgaacgcgcgcctcgacccgcggttgatcgacgacctgcgccgccaattgcagcaa
ttgccggtggcccagcgcgtctacgatcgggtcaagcgtcagaaactgcctgaaggtatc
ccggattttcgcatcaacgaagccgccggccgtgatgccgcgctggtgttcagccgcaaa
agcggcaaaccgttgggcgagccgttgagtggttttttcaccgccaagggttatcgccag
gcgtttctgctgagcagcctgaaccagaccggcaccctcgccgaagagcaatgggtgctc
ggccatgaacaggccgaccagcaaaatgtggtgagcctggccggtgatgtacgtcgcctg
tatttccaggattaccaacggcagtgggacgccttgctcgccgacatcgacttcgtgccg
atcaccagcgtggcccaggccgccgacgtgttgcgggtgatttccggcccgacctcgccg
ctgaaaaaactgctggtggctgtggccaaagaaaccgacctgcaagccgaagaacgccag
ctggccgccaaaggcgtgccggtggaaggcggtgtcgacaagctcaaggaacgcctcggc
agcctgctcggccaggagcagcaggcggcgagcaagcccgaggtggcggatgatccggtg
accgcgcactttgccgaactcaacagcatcgtcagcaaaaacgaaggcgagcccgcggcc
atcgacggcctgctggccgacatgaacgcgctgtatgtgcaggtcagcgccatggtcggc
gccagtggcgatgccttgctcggcgaggcaaagaaccaggcggcggctgcggccacgcgg
gtcagtctgaatgccgagcgtcagccgccgttggtgcagggcatggtcaagtcggtggtc
aactccaccaccaacagcatgatgggcggggtgcgtaaccaactgaacgcggcctgggtc
agcgaagtggtaaacgtgtatcgccagtccctcgccgggcgttacccgatggcgccgggc
agtgcccgcgatgccacgctggatgacttcggccagttcttcggggtgggcggggtgatg
gacaactacttccgcaaatacctgcagccctatgtggacacctccgcgcagacctggcgc
tggcagccgggcgcggcgcagaagctcgggattgcgccgggcgtgctgcaaaccttccag
cgggccgcgacgattcgtgatgcattcttccgcgccggcggcacgcagccgatcgtgcgt
tttgaactcaaaccggtgtcgatggacccgaccatcacccagttcctgcttgacctcgac
ggccagcaattgagctacgaccacggcccgagccgcccggtggccatgcaatggccaaac
cccggcagcattggcgtggtgcgcatttccatcatgccgccgtcggccagcgggcggtcg
ggcgtaaccctcgacgggccatgggcgtggttccgcctgctggaacaatcggacctcacg
gcgggcaactcgccggaccgtttcaacctgcgcctgcgggttgatggcgccagcatcgcc
tacgaattgcgcgccaacagcgccttcaacccgttcaagagtcgtgtgctcagcggcttc
agcctgccggagcggctatga
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