Pseudomonas tolaasii: I7845_28390
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Entry
I7845_28390 CDS
T08975
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
I7845_28390 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptol02044
]
I7845_28390 (tssC)
Secretion system [BR:
ptol02044
]
Type VI secretion system
Imp/Vas secretion system core components
I7845_28390 (tssC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
BMFP
TssC
Motif
Other DBs
NCBI-ProteinID:
QXQ18743
LinkDB
All DBs
Position
6333285..6334781
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AA seq
498 aa
AA seq
DB search
MTDNTARESSQILGTTEEASEFANLLLQEFKPKTERAREAVETAVRTLAEQALAQTDLVS
NDAIKSIESIIAAIDAKLTAQVNQIIHHQDFQQLESAWRGLHYLVNNTESDEQLKIRVLN
ISKPELHKTLKKFKGTAWDQSPIFKKMYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLG
ELSKVCAAMHSPFIAAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYI
GLTMPRFLARLPYGAKTDPVEAFAFEENTDGADSSKYTWANAAYAMAVNINRSFKHYGWC
SRIRGIESGGEVENLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTD
FAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDE
MQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVIVEEVEGNPGYYNSKFYLRPHYQLE
GLTVSLRLVSKLPSAKSA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaataccgcccgcgaaagcagccagatcctcggtaccaccgaagaagccagc
gagttcgccaacctgctgctgcaagaattcaaacccaagaccgagcgtgcccgcgaagcc
gtggaaaccgccgtgcgcaccctggccgaacaggctctggcgcaaaccgacctggtgtcc
aatgacgcgatcaagtcgatcgaatcgatcatcgccgccatcgacgccaagctgaccgcc
caggtcaaccagatcatccatcaccaggatttccagcaactggaaagcgcctggcgtggc
ctgcattacctggtcaacaacaccgagagcgatgagcaactgaagattcgcgtgctcaac
atctccaagccggaactgcacaagaccctgaagaagttcaagggcacggcgtgggaccag
agcccgatcttcaagaagatgtacgaagaggaatacggccagttcggcggcgagccatat
ggctgcctggtgggcgattactacttcgaccagtcgccacccgacgtggaactgctgggc
gagctgtcgaaagtctgcgccgccatgcactccccattcatcgctgcggcctcgccgacc
gtgatgggcatgggctcgtggcaggagctgtcgaacccgcgcgacctgaccaagatcttc
accaccccggaatacgccggctggcgttcgctgcgtgaatcggaagactcgcgctacatc
ggcctgaccatgccgcgcttcctggcgcgcctgccgtacggcgccaaaaccgacccggtg
gaagccttcgccttcgaagaaaacaccgacggcgccgacagctccaaatacacctgggcc
aacgccgcgtacgccatggcggtgaacatcaaccgttcgttcaagcactacggctggtgc
tcgcgcatccgtggcatcgagtccggcggcgaagtggaaaacctgccggcccacacgttc
ccgaccgatgacggtggcgtggacatgaagtgcccgaccgagattgccatcagcgaccgc
cgagaagcggaactggcgaagaacggtttcatgccgctgctgcacaagaagaacaccgac
ttcgccgcgttcatcggcgcccagtcgctgcagaagccggccgaatacgacgacccggac
gccaccgccaacgccaacctggccgcgcgcttgccgtacctgttcgccacctgccgtttc
gctcactacttgaagtgcatcgtgcgcgacaagatcggttccttcaaagagaaggacgaa
atgcagcgctggttgcaggactggatcctcaactacgtggacggtgacccggcgcactcc
accgaaaccaccaaggcccagcatccattggcggctgccgaagtgatcgtggaagaagtc
gaaggcaacccggggtattacaactccaagttctacctgcgcccgcactaccagcttgaa
gggctgaccgtgtcgttgcgtctggtatcgaagctgccttcggcaaaatccgcgtaa
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