Planktomarina temperata: RCA23_c00150
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Entry
RCA23_c00150 CDS
T03229
Name
(GenBank) putative MFS-type transporter
KO
K06902
MFS transporter, UMF1 family
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptp04131
]
RCA23_c00150
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c00150
Membrane trafficking [BR:
ptp04131
]
Autophagy
Other autophagy associated proteins
Others
RCA23_c00150
Transporters [BR:
ptp02000
]
Major facilitator superfamily (MFS)
Unknown transporters
Unknown major facilitator-1 (UMF1) [TC:
2.A.1.24
]
RCA23_c00150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG22
MFS_1
Motif
Other DBs
NCBI-ProteinID:
AII85588
UniProt:
A0AAN0RG69
LinkDB
All DBs
Position
complement(15796..17181)
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AA seq
461 aa
AA seq
DB search
MSKSTKEQAILVKRVRGWMMFDWATQPFYTLGLTFIFGPYFAGVAAEHYLSSGLDPTSAK
ANAQSIWSWGQAMAGFIVAIIGILAGAYADSTGRRMPWIWASSLVFVICSWMLWYMVPDG
SAMWSSLIFFSIAFIAAELALVFTNAILPSLGDRREVGKISGSGAALGYAGGIISLFIML
FFFFDEGGKTFLVGLEPGFGWLEAQSREGTRAVGPLIAIWFVIFMLPFFLWVQESKTPNR
QGGLQRSLADLTDTLKSMVKRPSLFAFMGAQMFYRDALNGLYAFGGVYAVLVLGWGQTQL
GVFGILGGLSAAIVTWISGKFDRKLGPLPVIYFHIYVLIFVSLCIIGMSRDSFFGLALPE
GSALPDIIFYICGAAIGGSGGGIYAASRSMMVRHTNPNRPTEAFGLFALAGKATAFLAPL
LIGLFTYLLNDARLGFAPVVGLFVLGMLLLRWVNPNGDQET
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatcaacaaaagagcaggccattttagtcaaacgcgtgcgcggctggatgatg
ttcgactgggccacgcaacccttttacacccttggtttgacattcatctttgggccctat
tttgccggtgttgccgcagagcattacctgtccagcggattggatcccaccagcgccaaa
gccaacgcgcaatcgatatggtcttggggtcaggctatggccggctttatcgttgcgatc
ataggcattcttgccggtgcctatgccgacagtaccggtcggcgaatgccttggatttgg
gcctcctcattggtctttgtgatctgctcttggatgctctggtacatggtgccagatgga
tctgcgatgtggtcctctttgatcttcttctccatcgccttcatcgccgctgagctcgcg
cttgtattcaccaatgccattctccccagcctgggagaccggcgggaggttggaaaaatc
tcaggcagtggcgccgcactgggctatgccggcggtatcatcagcctatttatcatgctg
tttttcttttttgacgaaggcggcaagacctttctggtcggattggagcccggcttcggg
tggttggaagcccaaagccgcgaaggcacgcgggcggtcggccccttgatcgcaatttgg
ttcgtcatttttatgctgccatttttcctttgggtgcaagaaagcaaaacccccaatcgt
cagggcgggttgcaacgatcgcttgcggacttaacagacacgctcaagagcatggttaaa
cggccgagcctctttgccttcatgggcgcgcaaatgttctatcgcgacgccctcaacggg
ctttatgcctttggtggggtttatgcggttttggtcctgggctgggggcaaacgcagctt
ggtgtttttggaatactcggcggattatctgctgcaattgtcacctggatttcaggaaaa
tttgatcggaagctggggccgctgcccgtgatttactttcacatctatgtgctgatcttt
gtctcgctttgcatcattggcatgtccagagacagcttttttggtctcgccttgccggaa
ggctccgcactgcccgatatcattttctacatctgcggtgcggccattggtggctccggc
ggagggatctatgccgccagccgctccatgatggtgcgccacaccaatcctaaccgtcca
acggaagcctttggcctatttgccctcgccggaaaggccaccgcctttttggcaccgctt
cttatcggtttatttacctacttgctgaacgatgcccgcctaggctttgctcccgttgtg
ggactgttcgtcttagggatgcttttgctgcgctgggtgaacccaaatggagatcaagag
acgtga
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