Planktomarina temperata: RCA23_c02000
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Entry
RCA23_c02000 CDS
T03229
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase GlyA
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00260
Glycine, serine and threonine metabolism
ptp00460
Cyanoamino acid metabolism
ptp00630
Glyoxylate and dicarboxylate metabolism
ptp00670
One carbon pool by folate
ptp00680
Methane metabolism
ptp01100
Metabolic pathways
ptp01110
Biosynthesis of secondary metabolites
ptp01120
Microbial metabolism in diverse environments
ptp01200
Carbon metabolism
ptp01230
Biosynthesis of amino acids
ptp01240
Biosynthesis of cofactors
ptp04981
Folate transport and metabolism
Module
ptp_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RCA23_c02000 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RCA23_c02000 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RCA23_c02000 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RCA23_c02000 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RCA23_c02000 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RCA23_c02000 (glyA)
Enzymes [BR:
ptp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RCA23_c02000 (glyA)
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GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AII85765
UniProt:
A0AAN0VH61
LinkDB
All DBs
Position
complement(217544..218824)
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AA seq
426 aa
AA seq
DB search
MTSSLSQFFNADLADTDPALAQAIDKELTRQRDEIELIASENIVSKAVMQAQGSVMTNKY
AEGYVGRRYYGGCEYVDIAETLAMERACQLFGCEFANVQPNSGSQANQGVFQALLQPGDT
ILGMSLDAGGHLTHGAAPNQSGKWFNAVQYGVRKQDNLLDYDQVQELATQHKPKLIVAGG
SAIPRQIDFKRMREIADSVGAYLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTLRGP
RGGMIVTNDAALAKKFNSAIFPGIQGGPLMHVIAAKAVAFGEALKPEFKTYIQNVIANAQ
ALSDQLIKGGLDTVTHGTDTHVLLVDLRPKGVKGNATEKALGRANITCNKNGVPFDPEKP
TITSGIRLGSPAGTTRGFGEAEFRQIADWIIEVVDGLAANGEEGNAAVEAKVRSEVAKLC
ARFPIY
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacatccagcctctcccagtttttcaatgcagatctggccgataccgatccagccttg
gcacaggccattgataaagagctgactcgccagcgcgatgaaattgagttgatcgcctcc
gaaaatattgtctcaaaggccgtgatgcaggctcaaggctctgtcatgaccaacaaatat
gccgaaggctatgttggacggcgctactacggcggatgtgaatatgtggacattgccgag
accttggccatggagcgggcctgccaactgtttggatgcgaatttgctaatgtccagccc
aattcgggcagccaagccaaccaaggtgtctttcaagccctcttgcagccgggcgatacg
atcctcggcatgtccttggatgccgggggccatttgacccatggagccgcgcccaaccaa
tcgggcaaatggttcaatgctgtgcaatatggcgtgcgtaaacaggacaacttgctggac
tatgatcaagttcaagagctggccactcagcataagcccaagctcattgtagcgggcgga
tctgccattccgcggcaaatcgatttcaagcgtatgcgtgagatcgccgacagcgttggc
gcctatctgcacgttgatatggcgcatttcgcgggcctcgtggcggcgggtgaacaccca
agccccttcccccatgcacatgtggcgacaaccacaacgcacaagacccttcgtggccct
cgcggtgggatgatcgtgaccaatgacgcggccctggccaagaagtttaattcggccatc
ttcccaggcattcaaggtggacccttgatgcatgtgatcgccgccaaagccgtcgcattt
ggcgaagctttgaaacctgagtttaagacttatatccaaaacgtgattgccaatgctcag
gccctgtctgatcagctgatcaaaggcggtctggatacggtgacccacggaaccgatacg
catgttttgctggtcgacctgcgccctaaaggcgtgaagggcaatgccaccgagaaagcc
ctcggccgcgccaatattacctgcaacaagaacggcgtgcccttcgatccagagaaacca
actatcaccagcgggatccgtctcggcagcccagcgggcacaacccgcggctttggcgaa
gcagaatttcgccaaattgccgattggatcatcgaagtggtcgatggattggcagccaat
ggcgaagagggaaatgcagctgttgaggcaaaagtccgatccgaggtcgccaagctctgc
gcccgtttcccgatttactga
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