KEGG   Planktomarina temperata: RCA23_c03000
Entry
RCA23_c03000      CDS       T03229                                 
Symbol
hmrR
Name
(GenBank) HTH-type transcriptional regulator (copper efflux regulator)
  KO
K19591  MerR family transcriptional regulator, copper efflux regulator
Organism
ptp  Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptp03000]
    RCA23_c03000 (hmrR)
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:ptp01504]
    RCA23_c03000 (hmrR)
Transcription factors [BR:ptp03000]
 Prokaryotic type
  Helix-turn-helix
   MerR family
    RCA23_c03000 (hmrR)
Antimicrobial resistance genes [BR:ptp01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexPQ-OpmE [MD:M00769]
    RCA23_c03000 (hmrR)
SSDB
Motif
Pfam: MerR-DNA-bind MerR_1 MerR DUF2205 UBAP-1_UBA2
Other DBs
NCBI-ProteinID: AII85864
UniProt: A0AAN0RGS0
LinkDB
Position
327811..328200
AA seq 129 aa
MNIGEVAKMADLPIKTIRYYEEIGFIQPKRSANGYRSFRESDVHKLAFLGRARSLGFSIE
DCRALLQLYENDTRASADVKQIAQEHLTRIDAKVKELQAMRNTLSHLIEACAGDDRPTCP
ILSDLATLS
NT seq 390 nt   +upstreamnt  +downstreamnt
atgaatattggtgaagtggcaaaaatggcggacttgccgatcaaaaccattcgctactat
gaagaaattggctttattcagcccaagcgcagcgccaatggatatcgcagctttcgcgag
agcgatgtgcataaattggcatttctgggccgggcgcggtctttggggttttctatcgaa
gattgccgggccttgctgcaattatatgaaaatgacacgcgcgccagtgccgatgtgaag
caaattgcccaggaacatttgacgcgcatcgatgccaaggtcaaagaattgcaggccatg
cgcaacaccctatcgcatctgatcgaagcctgcgccggcgatgaccgccccacgtgccca
atcttgtccgatcttgcgacgctgagttga

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