Planktomarina temperata: RCA23_c03350
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Entry
RCA23_c03350 CDS
T03229
Name
(GenBank) hypothetical protein, OmpA family
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c03350
Transporters [BR:
ptp02000
]
Other transporters
Pores ion channels [TC:
1
]
RCA23_c03350
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
LpxI_N
Motif
Other DBs
NCBI-ProteinID:
AII85897
UniProt:
A0AAN0VHA0
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All DBs
Position
complement(360426..361268)
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AA seq
280 aa
AA seq
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MPIGLVQSSQTEQSLATLNVPTGVWNGSEVPSVTLTGQVTKTTFQSSEIRKPDAVAAAIW
PQLDAQGYDLALQCADQTCGGYDFRFTLPVVPPPHMFVDLGDYVFLSGLKDGTQGLWLLI
SRSLGQTHVQLTQVRPADVPPIELSSASLTSASGVLETDLIATGRYVLADLTFDAGSARL
DKASFASLQALGDYLIRHSDQSIALVGHTDSSGSHEANLDLSKQRAEAVRTMLLDQFPLI
SPTRVGCEGIGYFSPLASNAAPEDREINRRVEVILVPTRP
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcggtctggtgcaaagcagccaaactgagcagagcttggcgaccctgaatgta
cccaccggcgtttggaatggctccgaggtgcccagcgtcaccctcacaggacaggtcaca
aaaaccacatttcagtccagcgagatccgaaaacccgatgcggtggcggctgcaatttgg
ccacaactggacgcacagggctatgacttggccttgcaatgcgcagatcaaacctgcggc
ggttatgatttccgctttaccctgccggtcgtgcctcccccgcacatgtttgtggatctt
ggcgactatgtctttttatctggactaaaggacggcacccagggcctatggctattgatc
agccgttctttgggtcaaacccatgtgcaactcacccaggtcagaccagcggacgtaccg
ccgattgagctgtcttcggcatcgctgacatcagccagcggcgtcttggagacagatctc
atcgccaccgggcgttatgtgcttgcagatctcacgttcgacgcgggatcggcacggttg
gacaaggcgagtttcgcctcgctacaggcactcggtgactatttgatacgccacagcgat
caatccatcgccctcgtaggtcacacggattccagcggatcacatgaggccaatcttgat
ctgtccaaacaaagagccgaggcggtgcggacaatgttgctcgatcaattccctctgatt
tcgccaacacgggtgggttgtgaagggatcggatatttctcacccttggccagcaacgcc
gcgccagaggaccgcgagatcaatcggcgagtcgaagtgatcttggtgccgacgcgcccc
tag
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