Planktomarina temperata: RCA23_c03950
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Entry
RCA23_c03950 CDS
T03229
Name
(GenBank) hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
ptp
Planktomarina temperata
Pathway
ptp02010
ABC transporters
ptp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RCA23_c03950
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RCA23_c03950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c03950
Transporters [BR:
ptp02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RCA23_c03950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AII85957
UniProt:
A0AAN0VHB9
LinkDB
All DBs
Position
complement(418885..420231)
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AA seq
448 aa
AA seq
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MSKSILTRRNVLQTGAAAGAGLALPTILTAGSHSGYTNAPTGSTVTLGFNVPQTGAYADE
GADELRAYMLAVEHLNGEGDGGMLNTFSSKTLEGNGILGKKVEYVTGDTQTKSDAARASA
KSMIEKDGAVMITGGSSSGVAIAVQGLCQEAGVIFMAGLTHSNDTTGKDKKANGFRHFFN
GYMSAAALAPVLQARYGSDRNAYHLTADYTWGWTQEESIAAATEAMGWNTVNKVRTPLKA
TDFSSYIAPVLNSGADVLVLNHYGGNMVNSLTNAVQFGLRDKVVNNKNFEIIVPLYSRLM
AKGAGANVKGIFGSTNWHWSLQDEGSKAFVKSFGTKYGFPPSQAAHTVYCQTLLYADACN
RAGTFNPCGVGEALEGFEFDGLGNGKTLYRADDHQCFKDVLVVKGKENPTSEFDLLEIVE
VTPMEQVKYAPDHPMFAGGDLGACNPGA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatcaattctgacccgtcgtaacgtgttgcaaaccggagccgctgctggcgct
ggattggcactgccgacaattttgaccgcaggaagccacagcggttacaccaatgcgcca
actggcagcacagtcaccttgggcttcaacgttccccagaccggcgcctatgctgacgaa
ggtgccgacgagctgcgcgcttacatgctggctgttgagcacctcaatggtgaaggcgac
ggcggcatgctcaacaccttctcttccaaaactctggaaggtaacggcatcctgggcaag
aaagttgaatatgtaacaggtgacacgcaaaccaaatccgacgcggcgcgtgcctctgcc
aaatccatgatcgaaaaagacggcgccgtgatgatcacaggcggttcgtcttctggtgtt
gcgattgccgtacagggtctgtgccaagaagctggcgtgatcttcatggcgggtctcacc
cactccaatgacacgacaggtaaagacaaaaaagcaaatggcttccgtcacttcttcaac
ggttacatgtctgcggcagctttggcacctgtgcttcaagcgcgttacggcagcgaccgg
aacgcctatcacctgaccgctgactatacttggggttggacacaagaagaatccatcgct
gcagccactgaggctatgggctggaacactgtcaacaaagtgcgcacaccgctcaaagcg
acagacttctcctcttacattgccccagtgctgaattctggtgcggatgttttggttctg
aaccactacggcgggaacatggtgaactctttgacgaacgctgttcagtttggcctgcgt
gacaaagttgtgaacaacaagaactttgaaatcatcgttccgctgtactctcgcttgatg
gcgaagggtgcgggcgccaacgtgaagggcatctttggctcgacaaactggcactggtcc
ttgcaggatgaaggctccaaagcctttgttaaatccttcggcacaaaatacggcttccct
ccttcacaggcggcacacaccgtatattgtcaaactctgctctatgcagatgcgtgtaac
cgcgctggcacattcaatccatgtggtgttggcgaggccttggaaggctttgagttcgac
ggtctgggcaatgggaaaacattgtaccgcgccgacgatcatcagtgcttcaaagacgtg
ctggttgtgaagggtaaagagaacccaacatccgagtttgaccttctggaaatcgttgaa
gtgacaccaatggagcaagtaaaatacgctccagatcacccaatgtttgccggtggcgac
ttgggcgcatgtaacccaggtgcttaa
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