Planktomarina temperata: RCA23_c04410
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Entry
RCA23_c04410 CDS
T03229
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit XseB
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ptp
Planktomarina temperata
Pathway
ptp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RCA23_c04410 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptp03400
]
RCA23_c04410 (xseB)
Enzymes [BR:
ptp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RCA23_c04410 (xseB)
DNA repair and recombination proteins [BR:
ptp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RCA23_c04410 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TACC_C
ARM_TT21_5th
Motif
Other DBs
NCBI-ProteinID:
AII86001
UniProt:
A0AAN0RGU7
LinkDB
All DBs
Position
474013..474255
Genome browser
AA seq
80 aa
AA seq
DB search
MADAQIAQMSFETAMAELEQVVTQLERGDVALDDSITLYERGAALKAHCEAKLKSAEEKV
AAITLTGDGQPAGVAPLDAG
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgcacagattgcgcaaatgagctttgaaaccgcaatggccgagttggagcag
gttgtgacgcaattggaacggggtgatgtggctttagatgactccattaccctttatgaa
cggggcgcggctctcaaagcgcattgcgaagccaagttgaaatctgccgaggagaaggtc
gcagccataaccttgactggcgatgggcagcccgcgggcgttgctccgttggacgcgggt
tga
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