Planktomarina temperata: RCA23_c04480
Help
Entry
RCA23_c04480 CDS
T03229
Name
(GenBank) hypothetical protein, CoA-binding protein
Organism
ptp
Planktomarina temperata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_5
Succ_CoA_lig
CoA_binding_2
Ligase_CoA_2
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
AII86008
UniProt:
A0AAN0RH13
LinkDB
All DBs
Position
complement(479918..481945)
Genome browser
AA seq
675 aa
AA seq
DB search
MRDLTRLLKPKSIAVIGGGAWCASIVSAAEQIGFDGVLHPVHPSGKQIAGRKSLPSLEAF
PGHIDAAFIGVNRHATLEVVAQLRSLKAGGATCFASGFSEAAAEDSAAQDLQAQLIKAAG
DMPILGPNCYGFVNAFDGCAIWPDQHGCRRVDKGVAILTQSSNIAINLTMQNRGLPIGYM
LTCGNQAQTSQTDIALQLLDDARVTAIGLHIEGFGNLRGWETLAEKARSKGIALIALKSG
VSQQAQAAAVSHTASLTGSDTGADAFLHRLGIRRARSLPVFLEALKLAHQFGHLSSNRIA
SISCSGGEAALAADTAQGTGLVFPPLNPRQVKDLGAALGPMVALANPLDYHTYIWRNPAA
MTQAWAAMADDDIAMTLLISDYPRADLCDASDWECVTQAAIEATRRTGRPYAVVASLAEL
LPEHIAKTLMDHGVGAIHGLDHGLDALDLLSRPMTPPADPVLLPGSDRDAGLLDEQSAKL
ALAACGLKIPKSVAVTDRSTAGPAAAEVGFPVALKTLGLAHKTGANGLALGLTTPAEVEA
AAQSLADGPLLVERMVAGSLVEVLVGVTRDPAHGFVLTLGAGGTMTEVLRDRASLLIPAS
RKEVKARLMGLKIAPLLKGFRGKPPVNLDALLDSIDAVQAYVLANAEQVEEVEINPLICT
QEAAIAADALIRKAQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcgagacctaacaagacttcttaaacccaagtctatcgctgtcatcggcggtggcgct
tggtgtgcctcaattgtctcagcggccgagcagattgggtttgacggtgttttgcatccg
gtgcaccccagcggaaaacagatcgcaggccgtaaatcattgcccagcctagaggcgttt
cccggccacattgacgccgccttcatcggcgtgaaccgtcatgccaccctagaggtcgtg
gcacagctgcgcagtttaaaggccgggggagccacctgttttgcctcgggtttttccgaa
gcggctgccgaagattccgcggcgcaagatcttcaagcgcagctgattaaggccgccggg
gatatgccaatattggggcccaattgctatggttttgtgaatgcttttgatggctgcgct
atttggcctgatcaacatgggtgccgcagagtggacaagggcgtcgcgattttgacccaa
agctcgaacatcgccatcaacctcacgatgcagaaccgcggtcttccaattggctatatg
ctcacctgtggcaaccaagctcaaacctcccaaaccgatatcgcgttgcagctgttggac
gatgcgcgtgtcacagcgattggcctgcacatcgaaggatttggcaatctgcgcgggtgg
gagaccctcgccgagaaagcccgcagcaagggcatcgccttgattgccttgaagtctgga
gtgtcgcagcaagcccaagcggcagctgtgtcccataccgcctccttgaccggcagtgat
accggggctgacgcctttctccaccgtttgggcattcgccgggcgcggagcctgccggta
tttctagaggcccttaaacttgcccatcaatttgggcatttatccagcaaccgcattgcc
tcaatttcctgttcagggggagaggccgccttggctgccgatactgcgcagggcactggg
ttggtttttccaccgctcaacccgcggcaagtcaaggatctcggtgcggccttggggccg
atggtggccctggccaacccgctggattatcacacgtatatttggcgcaaccccgcggcc
atgacacaggcttgggcggcgatggcagatgatgatattgccatgaccttgctgatcagt
gactacccacgggcggatctttgcgatgccagcgattgggagtgtgtcacgcaggccgcg
atagaggccacgcggcgcaccgggcggccctatgcggtggtggcgagcctggcggaactg
ttgccagaacacattgccaaaaccctgatggaccatggcgttggtgccattcacgggctg
gatcatgggctggacgctttggatcttttgtcccgccccatgacgccgccggccgaccct
gtgcttttgccgggcagcgaccgcgacgcggggctcctcgatgagcaaagcgccaaactg
gcactggcggcctgtggtctgaagatcccgaaatccgtcgccgtcaccgatcgcagcacg
gccgggccggctgcagctgaggtcggctttcctgtcgcgctgaaaactctggggcttgcg
cataagaccggagccaatgggttggctttgggcttgaccactccggcggaggtcgaagcc
gcagcacaaagcttggccgatgggccgctcttggtcgagcgcatggtggccgggtctttg
gttgaagttttggtcggcgtcacgcgcgatccggcgcatgggtttgttttgacccttggc
gcaggcggtacgatgaccgaagtgttgcgcgatcgtgcaagcctgctcattcctgcaagc
cgcaaggaggtgaaagcgcggctcatgggattgaaaatcgcgccgctcctaaaggggttt
cgcggcaagccgcccgttaatctagacgcactcctcgactccattgacgcggtgcaggcc
tatgtgcttgccaatgcagagcaggtggaggaagttgagatcaacccgctgatctgtaca
caggaggcggcaattgccgccgatgccttgataaggaaagcccaatga
DBGET
integrated database retrieval system
