Planktomarina temperata: RCA23_c05140
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Entry
RCA23_c05140 CDS
T03229
Symbol
xylF
Name
(GenBank) D-xylose-binding periplasmic protein XylF
KO
K10543
D-xylose transport system substrate-binding protein
Organism
ptp
Planktomarina temperata
Pathway
ptp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RCA23_c05140 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c05140 (xylF)
Transporters [BR:
ptp02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
RCA23_c05140 (xylF)
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GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AII86074
UniProt:
A0AAN0RH49
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Position
550504..551532
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AA seq
342 aa
AA seq
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MNKLIIAAAVAAAGFTGSAALAEGMSIGVSWASFQEERWKIDEAAMVAAIEAAGNTYVSA
DAESSSAKQLTDIEALITQGVDALVINAWDKDAIAPAIEAAANEGIPVIGYDRLIEDDRT
FYLTFDNIGVGRIIAKSVQAVQPSGNYAIIKGDPGDPNAMFLLQGMMEVIGADVDAGKIK
IVGESFSDGWKPENAQKNMEQILTANDNNVDAVLSENDGMAGGVVAALSAQGLVIPVGGQ
DGDLAAINRVARGTQTVSVWKDARDLGKAAGEIASALAAGTSMDAIEGATKFTGGEKGIA
INAILLEPTPLTRDNLSVAINGGHITKEQACAGALPGVDGCN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaataagctaatcatcgcagccgcagtcgcggcagctggttttacagggtccgctgct
ttggcagagggcatgtccatcggtgtgtcttgggcaagtttccaagaggagcgttggaaa
atcgacgaagcggcaatggttgctgccattgaagcggctggcaacacctatgtttccgca
gatgcggaatcatcttccgccaaacagttgaccgacattgaagcgctgatcacacagggc
gtggacgctttggttatcaacgcttgggataaagacgcaattgcacctgctattgaagct
gctgcaaacgaaggcatccctgtgatcggctatgaccgcctgattgaagatgaccgtaca
ttctacctgacattcgacaatatcggcgttggccgcatcattgcgaaatctgtgcaggcg
gttcagccaagtggcaactatgcgatcatcaagggcgatccgggcgatccaaacgcgatg
ttcctgctgcaaggtatgatggaagtcatcggcgccgatgttgacgcgggcaaaatcaaa
atcgttggtgaatctttctccgatggatggaagccagaaaatgctcagaaaaacatggag
caaatcctgacagccaatgacaacaacgtggatgcggttctgtcagaaaatgacggcatg
gctggcggtgttgttgccgcgctttccgcgcagggtcttgtgatcccagtgggcggtcaa
gatggcgacttggcagcgatcaaccgcgttgcacgtggcacgcagactgtgtccgtttgg
aaagatgctcgcgatctgggcaaagcggccggtgagattgcctctgctctggcagctggc
acatccatggatgccatcgagggcgcgaccaagtttacgggtggcgaaaaaggcattgca
atcaatgcaatccttctcgaaccaacacctttgacacgcgacaatctgagcgttgcaatc
aatggtggtcacatcaccaaagagcaggcctgcgccggtgctttgcctggtgttgacggc
tgtaactaa
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