Planktomarina temperata: RCA23_c05270
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Entry
RCA23_c05270 CDS
T03229
Name
(GenBank) putative P-loop containing ATPase
KO
K06958
RNase adapter protein RapZ
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptp03019
]
RCA23_c05270
Messenger RNA biogenesis [BR:
ptp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RCA23_c05270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
Rad17
AAA_16
AAA_29
AAA_28
T2SSE
AAA_23
AAA_30
IIGP
Motif
Other DBs
NCBI-ProteinID:
AII86087
UniProt:
A0AAN0RH70
LinkDB
All DBs
Position
566967..567878
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AA seq
303 aa
AA seq
DB search
MTDKTQPVHVVLVTGPSGAGRTTAINALEDAGFESIDNMPLSLAPRLFEQPGLSRPMALG
LDTRNRDFSTAQMMDTIATLSANPSLTLEVLYLDCSEDVLIRRFSETRRRHHLSPDGAAL
AGIQLDLDLMQPARVRANVLIDTTQLSPHDLRAEVTRYFAPDKVNPMAISVQSFSYKRGT
PRGIDMMFDCRFLRNPYWDETLRAEDGRNPKVQAYVAEDSNFPAFKQKVLDLIDLVIPAH
VAEGRSHLAIGFGCTGGKHRSVTMVEMLQKELQLRGWHVSIRHRELLEQAAPSDTSDSKV
LSS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaacgcaaccggtgcatgttgtgctcgtgaccggcccatctggggccggg
cgaaccactgcgatcaatgctttggaagatgcgggctttgaatctattgataatatgcct
ttgagccttgcaccgaggttgttcgaacagccgggcttaagtcggccaatggctctaggc
cttgatacccgaaatcgcgatttctcgaccgcgcaaatgatggatacaattgcgacattg
tctgccaatccgtctttgactcttgaggtcctgtatttggattgttcggaggatgttctg
atccgccgcttctccgaaacgcgacgtcggcaccatctgtcgccagatggcgcggcgctt
gcggggatacagctggatttggatttgatgcagccggcgcgggtcagggccaatgttttg
atcgataccacccaattgtcgccccatgacctgcgcgcggaggtcacccgttattttgct
ccggacaaagtcaatccaatggcgatttctgtgcagtccttctcgtataaacgtggcaca
ccgcggggcattgatatgatgtttgattgtcgcttcctgcgcaatccttattgggatgag
actctcagagcagaagatggacgaaacccgaaggtgcaggcctatgtggccgaggatagt
aattttccggctttcaagcaaaaagtgctcgatttgatcgatcttgtgatcccagcccat
gtggcggaggggcggtcgcatctggccattggctttggctgtacgggcggcaaacatcga
tccgtcacaatggtcgaaatgttacagaaagaattgcaattgcgcggctggcatgtgagc
atacggcatagagagctgctggaacaggcggctccgtcggacacttcagactctaaggtt
ttgagcagttga
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