Planktomarina temperata: RCA23_c05670
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Entry
RCA23_c05670 CDS
T03229
Name
(GenBank) transporter, AcrB/AcrD/AcrF family
Organism
ptp
Planktomarina temperata
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AII86126
UniProt:
A0AAN0VHI5
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Position
608034..611426
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AA seq
1130 aa
AA seq
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MSVIRTATGGILSYMTRHRTAANLFLLIMLVAGAVSFPQMRAQFFPDVIIDRVTVSVRWD
GAGPEDVDRAIVQVVEPALLGIEGVNSTSATSSEGSARITMEFEPGWDMARGTDDAQIAV
DSVANQFPDDADDPKVTRGVWRDRVTDVVISGPVGVAQLALFADEFVTRLFAAGVTRTTI
RGVAAGSTIVEVDSLSLIRHDVSMAQIASAIAEEAEADPAGDVAGSARIRTGIAKRSARD
IRQIVLRSNADGSSLTVGDVARVTEEGVDRDRAYFVGAASAISIRIDRSDQGDAIEIQEQ
VQTTAAAMMESLPPDVNVELIRTRSEAISARLAMLLENGLQGLGLVLLLLFLFLNVRTAF
WVAAGIPAAMAAALALMYLSGLTINMISLFALIITLGIVVDDAIVVGEHADFRARVLGES
PVVAAENAAKRMFTPVFSATLTTVIAFFGLVAIGGRFGDLIADIPFTVIVVLIASLAECF
LVLPHHMAHSISVGSRIRWYDMPSHFMNYLLDQFKFYLFRPFIRFVIWARYPVFAAVVVA
LASQAVLFINGDVQWRFFNAPERGSVTGNFAMAPGATREDSLEQMRAFQTAVEAVGAQYE
EKYGRNPVDFSMAEIGGNTGRGLAGADTKDADQLGSIAVELIDADLRPYSSFAFVADLQD
AVIRHPRVETISFRGWRSGPGGDALDVQFSGADARRLKAASEALQTALARYPEVSAVEDT
LSYDKEELVLELTPQGQSLGLTIDTLGRVLRNRLNGIEAASFPDGPRSATIRVELPAGEL
TADFTDRMLIRTPNGGYVPLADIVTVQQRTGFSTVRRENGIQVISVTGDISEDDPARAQA
IVAELEETVLPKIAEETQVAFTLAGLAEQEDDFRNDATRGLILTLAGIFMTLAWIFSSWT
RPLVVMAIIPFGLIGTIYGHWWYDIPLSLFSVVGLIGMVGIIINDSIVLVTTIDEYSKER
GLFPAIVDGVTDRLRPVLLTTLTTVLGLSPLLYETSSQAQFLKPTVITLVYGLGFGVILV
LIVVPALMAMQADVGAQVASVKRALRGLWRGRGPRLPVVAALISLTALFAATLGAVIVSG
GVPQFWMGLPLAAHLSPLPFGLSLFLSGSALVVLLLYAVSAVIFARNLRR
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgatacgcaccgccactggcgggattttatcttacatgacccgacatcgcacc
gcggcaaaccttttcttgcttattatgctggtcgccggggctgtttcttttccgcaaatg
cgggcgcagttttttcccgatgtgattattgaccgcgtcacggtcagcgtgcggtgggat
ggcgctggaccggaggatgttgaccgggcaattgtgcaggtggttgaaccggcgttgctt
gggattgaaggggtgaacagcacctctgccacctcctcggaaggctctgcgcggattacc
atggaatttgagcccggctgggatatggcccgtggcaccgatgatgcccaaatcgccgtt
gattccgtcgccaaccagttccccgatgatgctgatgatccaaaagtcacccgtggggtc
tggcgcgaccgggtcacagatgtggtgatctccggtccggttggggtggcgcaattggct
ctatttgccgatgagttcgtcacaaggcttttcgccgcaggcgtgacccgcaccactatt
cgcggcgtggctgcgggctcaaccatcgtggaagtcgacagcttgtcgcttattcgtcat
gacgtgagcatggcacagatcgccagtgccatcgctgaggaagctgaggcggatcccgca
ggcgatgtggccgggagtgcgcgcattcgtacagggatcgccaaacgcagcgcccgggat
atcaggcagattgtcttgcgttccaatgccgatggctcgtcgctcaccgtgggcgatgtg
gcgcgggtgacggaagagggggttgaccgagatcgcgcctatttcgtgggcgcggcgtcg
gccatttccatccgcattgaccgctctgatcagggcgacgcgattgaaatccaggagcag
gttcaaaccaccgctgctgcgatgatggaatccttgccccctgatgtgaatgtcgaattg
atccgcacccgatcagaggcgatttctgcgcggctggccatgctgttggaaaatggcctt
caagggcttgggcttgtgcttttgctgttatttttgtttttgaatgtgcgcacggccttt
tgggtggccgcaggaattccggcggctatggcggcggctttggcgctgatgtatctgtca
gggctgacgatcaatatgatctcgctttttgctttgatcattacccttgggattgtggtc
gatgatgccattgttgtgggggaacacgcagattttcgcgcgcgtgttttgggggaaagc
cctgtcgtggcggcggagaatgcagccaagcgcatgttcaccccggtattttcggcaacg
ctgacgaccgtcatcgccttttttggcttggtggcgattggtgggcggtttggggatttg
attgccgatattccttttaccgtcatcgtggttttgattgcctcgctagccgaatgcttt
ttggttttgccccatcacatggcgcattctatttccgtcggctcacggatccgttggtat
gacatgccgtcacacttcatgaactacctgctggatcaatttaagttctacctgttccgc
ccgtttatcagatttgtcatttgggcgcgatatccggtgtttgcagctgtggtggtggcc
ttggccagtcaagcggtgctgttcatcaatggggatgtgcaatggcggtttttcaacgct
cctgagcgcggctcggtgacgggtaatttcgcgatggccccgggggcaacgcgggaagat
tcccttgagcaaatgcgcgcgtttcaaacggctgtagaagccgttggcgcgcaatatgag
gagaaatatggccgcaatccagtggatttctccatggccgaaattgggggcaataccggc
cgtggcttggcgggcgctgataccaaagatgccgatcaattgggctccattgccgttgag
ttgattgatgcggatttgcggccctattcgtcctttgcctttgtcgcggatttgcaagat
gcggtgattaggcatcctcgggtggagacgattagctttcgcggttggcgctccggtccg
ggcggcgatgcgctcgatgtgcaattttccggggctgatgcgcgccgacttaaagccgcc
tctgaggccttgcaaaccgctttggcacgatatccagaagtctcagctgttgaagacacg
ctctcctacgacaaagaggaattggtgttggagttgacgccgcaggggcaatctttgggg
cttaccatcgacacattgggccgggtgttgcgcaatcgcctcaatgggattgaggcggcg
agcttccccgatgggccgcgctcggccacgatccgtgtggaattgccggccggtgaattg
acggctgatttcaccgatcgcatgctgatccgcacaccgaacgggggctatgtgccgctg
gcagatattgtcaccgtgcagcagcgcaccggtttttcaacggtgcggcgtgagaatggc
atccaggtgatttctgtgacgggcgatatttctgaggatgacccggcgcgcgcgcaggcg
attgtggcggaattggaagaaacagttttgccaaaaatcgctgaggaaactcaagttgcc
tttaccttggctggattggcggaacaggaagatgatttccgcaatgacgccacacggggt
ttgattttgaccttggccgggatcttcatgactttggcttggattttctccagctggaca
cgccccttggtggtgatggccattattccgtttggcttgatcgggacgatttatggccat
tggtggtatgacatcccgctttcgctgttttctgtggttgggttgattggcatggtgggg
attatcatcaacgattccattgttttggtgacgacgattgatgaatattccaaagagcgg
ggcctatttccagcgattgtcgatggggtaacagatcggttaagaccggtgttgttgacg
acattgaccacggtgctcggcctgtcccctttgctttacgaaacctcgtcacaagcgcag
tttctcaagccaacggtgataaccttagtctatgggcttgggtttggggtgatcttagta
ttgatcgtcgtgccagccttgatggcgatgcaagcggatgtgggcgcgcaggtggcgagc
gtcaaacgggccctgcgcggcctctggcgtggccgcggaccgcgcttgcccgttgttgca
gcgctcatcagcctgaccgcccttttcgccgcgacccttggggcggtgatcgtgagtgga
ggggtgccgcagttttggatggggttgccattggcggcccatctgtcgcccttgccattt
gggctttcgctatttttgagcggctcagcgctcgttgtgttgttgctttacgcggtgtca
gccgtgatctttgcgcggaatttgcggcgctag
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