Planktomarina temperata: RCA23_c06160
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Entry
RCA23_c06160 CDS
T03229
Name
(GenBank) putative HTH-type transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptp03000
]
RCA23_c06160
03036 Chromosome and associated proteins [BR:
ptp03036
]
RCA23_c06160
Transcription factors [BR:
ptp03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
RCA23_c06160
Chromosome and associated proteins [BR:
ptp03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
RCA23_c06160
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
MarR_2
HTH_IclR
HTH_Crp_2
HTH_34
HTH_11
Fe_dep_repress
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AII86175
LinkDB
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Position
661282..661740
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AA seq
152 aa
AA seq
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MKLDATDRRLLSVLQVKGRISNSDLADQVNMSASACHRRVGRLEAEGYIRDYVALVDPRK
VDRRTTVFVEITLSGQTEDVLVAFEKAVALIPDVLECHLMAGSADYLLKVVAKDTDDFAK
IHRTFLAKLPGVTQMQSSFALRTVFKTTALPL
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagacgctacagatcgtcgattattatcagttttgcaggtcaaaggccgcatt
tcgaattcggatttggccgatcaggtcaatatgtccgcttccgcctgtcataggcgtgtc
ggccgcctggaggctgaaggctatatccgcgattatgtggcgctggtggatccgcgcaaa
gtggaccgccgcacgaccgtgtttgtggagattactttaagcgggcaaacggaagatgtt
ttggtggccttcgaaaaggcagtggcgctgattcccgatgtcttggagtgtcatttgatg
gccggcagcgcggattatttgcttaaagtcgtggcgaaagacacggatgatttcgccaaa
attcatcgtacctttctggccaagttacccggtgtcacgcaaatgcagtcaagctttgcg
ctgcgcaccgtgtttaaaaccaccgcacttccgctttag
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