Planktomarina temperata: RCA23_c06230
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Entry
RCA23_c06230 CDS
T03229
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ptp
Planktomarina temperata
Pathway
ptp03030
DNA replication
ptp03430
Mismatch repair
ptp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RCA23_c06230 (dnaX)
03430 Mismatch repair
RCA23_c06230 (dnaX)
03440 Homologous recombination
RCA23_c06230 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptp03032
]
RCA23_c06230 (dnaX)
03400 DNA repair and recombination proteins [BR:
ptp03400
]
RCA23_c06230 (dnaX)
Enzymes [BR:
ptp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RCA23_c06230 (dnaX)
DNA replication proteins [BR:
ptp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RCA23_c06230 (dnaX)
DNA repair and recombination proteins [BR:
ptp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RCA23_c06230 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
RuvB_N
AAA_30
AAA_5
AAA_22
AAA_19
AAA_16
AAA_14
AAA_24
TIP49
AAA_18
Glyco_tranf_2_5
Rad17
DUF815
TsaE
nSTAND3
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
AII86182
UniProt:
A0AAN0VHJ6
LinkDB
All DBs
Position
complement(666067..667857)
Genome browser
AA seq
596 aa
AA seq
DB search
MTDTAAYQVLARKYRPETFADLVGQDAMVQTLRNAFEADRIAQAFIMTGIRGTGKTTTAR
IIAKGMNCIGPDGTSGPTIDPCGSCEHCTAIMEGRHVDVMEMDAASRTGVGDIREIIDSV
AYRAASARYKIYIIDEVHMLSTNAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSRCQ
RFDLRRIEPDVMISMLQRIAKAEGAEITEEALGLITRAAEGSARDAQSLLDQAISHGAGE
TTADQVRAMLGLADRGRVLDLFDLILRGDAEGALGELSAQYAAGADPMAVLRDLAEVSHW
VSVIKITPVAAEDPTVSPDERSRGLVMAERLQMRMLSRMWQMLLTALEEVGRAPNAMMAA
EMALIRLTHVADLPTPDELIRKLQNTPVPTPEPQNAGTPHGAGGGPRQSAPATAPQATNP
SAYGADTMAPRAQRSSGTTASAAQAKAPAAETLAHFARFEDVLELIRHHRDVKLLVDVET
SLKLVSYSPGRIEFEPTEKAPRDLAQRLGSRLQTWTGQRWAVSIGTNGASTIAELRDAAA
LELKEQAKAHPLVQAVLVAFPKAQISDIRTAKDIAAEAQIDALPEVEDEWDPFDDE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgctgcatatcaagttttggcgcgcaaataccgcccagagacctttgcc
gatttggttgggcaggacgctatggtccaaaccctgcgcaatgcctttgaagccgaccgc
atcgcccaagccttcatcatgacgggcattcgcggaaccggcaaaaccaccactgcgcgc
atcattgccaagggcatgaattgcatcggtcccgatggcacaagcggcccaaccatcgac
ccctgtggcagctgcgagcattgcacggccatcatggaggggcgccatgtcgacgtgatg
gagatggatgccgccagccgcaccggcgttggcgatattcgcgaaattattgattcggtg
gcctatcgtgccgcctctgcacgctacaagatctatatcatcgatgaggtccacatgctg
tcgaccaacgctttcaacgcgttgctcaagaccttggaggagccgcctgcgcatgtgaaa
tttatctttgccaccacagaaattcgcaaagtccccgtgacagttctgtcgcgctgtcaa
agatttgatctgcggcgcattgaaccggatgtcatgatttcgatgctgcagagaatcgca
aaagcagagggcgccgagatcacagaagaggcgctgggtctcatcacccgcgccgctgaa
ggctcggcccgcgatgcgcaatcgcttctggatcaggccatctcccacggcgctggagaa
accacagccgatcaggtccgcgccatgctgggtcttgcggatcgagggcgggttttggat
ctgttcgatctgattttgcgcggggatgcggaaggtgccttgggcgagctgtctgcgcaa
tatgccgccggcgccgatcctatggcggtcttgcgcgacctggcagaggtcagccattgg
gtcagcgtcatcaagatcacgcccgtggccgccgaagatcccacggtctcgcccgatgaa
cgaagccgagggctggtcatggcagagcggttgcagatgcgcatgttaagccgaatgtgg
caaatgctgctcaccgccctagaagaggtcgggcgggcacccaatgcgatgatggctgca
gaaatggcgttgatccgcctaacccatgtggccgatctgcccacgccagatgaattgatc
cgaaagctgcaaaacacgcccgttcccacaccagaaccccaaaacgctggcacccctcat
ggagcgggcgggggaccgcgccaaagcgccccggccaccgccccacaagcgaccaaccca
tcagcctatggcgcggacacgatggcccctcgggcccaacgatccagcgggaccacagcc
tcagccgcgcaggcaaaggcccccgcggcagagacgctggcgcattttgctcggtttgag
gatgtgttggagctgatccgccatcaccgcgacgtcaaactcttggttgatgtggaaacc
agtttaaaattggtcagctatagccccggccggattgaatttgagccgacagaaaaagcc
ccgcgtgatctggctcaacgactgggcagccggttgcaaacctggaccgggcagagatgg
gccgtctctatcggcaccaatggcgcaagcaccatcgcagagctgcgcgatgcggccgcc
cttgagctcaaagagcaagccaaggcgcaccctttggtgcaagcagtccttgtcgccttt
cccaaggcacagatcagtgacattcgcaccgccaaagatatcgcggcggaggcgcagatc
gacgccctgcctgaggtcgaagatgaatgggatccctttgacgacgaataa
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