Planktomarina temperata: RCA23_c07200
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Entry
RCA23_c07200 CDS
T03229
Symbol
lpcC
Name
(GenBank) lipopolysaccharide core biosynthesis mannosyltransferase LpcC
Organism
ptp
Planktomarina temperata
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Glyco_trans_4_2
Glyco_trans_1_2
Glyco_transf_4
GT4-conflict
Motif
Other DBs
NCBI-ProteinID:
AII86278
UniProt:
A0AAN0RHI8
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Position
complement(771961..773130)
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AA seq
389 aa
AA seq
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MTANATWNIWNFRRPVVEALLADGNRVTVLAPLDDAVRDLEHLGCHVRPLTMGVKGLNPL
EDLKLQCRFKRIFREEEPDVVLSYTIKNNVFGAQAARSVGVPFLPNVTGLGTAFLSSKLL
QTITEQLYRRSFSTLTTVFLQNKDDRDLFLKRSLVRLDQAQLLPGSGIDLVRFAPAAMLP
VDRAPVFLMIARLLRDKGVLEFIDAAKKIKARHPKARFQLLGAAGSENRSAIDHATVDAW
VKEGVVEYLGTTKDVRPAIAAASCVLLPSYREGAPRTLIEAAAMARPVISTNVPGCRAVV
DHNVSGFLCDVRSAESLAAAIERFLSLSPEAQQAMGQSGRAKMEQKYDQSIVVDAYRDAI
SRIVRPGKVSVNGYGFPTHLKADQYASAS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgaacgccacctggaacatatggaattttcggcgacccgtggttgaagcgttg
ctggctgacggcaaccgggtcacggttctcgcgccgttggatgatgctgtgcgcgacctt
gagcatctcggttgccatgtgcgtcctctgacgatgggcgtgaagggtctcaaccctctc
gaggatttgaaacttcagtgcagattcaaacggatatttcgcgaggaagagccagacgtt
gtactgagctatacaatcaagaataatgtttttggcgcgcaggccgcgcgatcagtgggc
gtgccgtttctaccaaatgtgactggactgggcactgcatttttgtctagcaagctactg
caaaccataaccgagcagttgtaccgacgatctttcagcacactgacgaccgtatttctc
caaaacaaggatgaccgtgacttgtttctcaagcgctctttggttcgcctagatcaggcc
caactgctgcctggctcgggcattgatctagtccgctttgcgcccgcagcgatgcttccc
gtggatcgcgcgcctgtcttcttgatgatcgcccggcttttgcgcgataaaggtgttctg
gaatttatcgacgcagccaagaagatcaaggcgcgccatccgaaagcgcggttccaactt
cttggagccgctggatcggaaaatcgcagcgctattgatcatgcaacggtcgatgcttgg
gtaaaagaaggcgtggtggaatatcttggtacaaccaaggacgtgcgcccagcgattgcg
gcagcttcgtgtgtgcttctgccatcataccgggagggcgcaccgaggacccttattgag
gcggccgcaatggcccgccccgtgatcagcacgaacgttccgggatgtcgagctgtagtc
gaccataatgtctcaggctttctctgcgatgtacgcagtgctgagagcctcgctgccgcg
atcgagcggtttctgtcgctgtcgcctgaggcacaacaggccatggggcaatccggtcgg
gccaaaatggaacaaaaatatgaccagagcatcgtggtggacgcttaccgtgatgcaatt
tcacgcattgtgaggcccgggaaggtaagtgtaaatggatacggttttcctactcatctc
aaagctgatcagtacgcttctgcgtcctga
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