Planktomarina temperata: RCA23_c07310
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Entry
RCA23_c07310 CDS
T03229
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00500
Starch and sucrose metabolism
ptp01100
Metabolic pathways
ptp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RCA23_c07310 (glgX)
Enzymes [BR:
ptp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RCA23_c07310 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
AII86287
UniProt:
A0AAN0VHN5
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All DBs
Position
780903..782972
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AA seq
689 aa
AA seq
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MTVSNILAGKASPLGATLDPDGVNFAVFSRHATTVTLCLFDNAGIEVRQIALPERQGHVW
HGYIPGLRKGQQYGFRMDGPYKPEQGHRFNHNKLLIDPYAKQLTGHPTWNDALFSYQPGH
KNKDLSFNKQDSGPYMPRSVVVDPYFDWGTVTAPGHHLKDTIVYEAHVKGLTAGHPRIPN
PGTYAAMASDPMLEHLNKLGITAVELLPVQAFMNDKFLLDRGLTNYWGYMTYGFFAPDPR
YMKGGDIAEFQQMVRRFHSADIEVILDVVYNHTAEGSELGPTLMFRGLDNASYYRLHENP
RYYTDDSGCGNTLDFENPFVIRLVMDSLRYWVEVMKVDGFRFDLCSTLGRTARGFERDGP
FFRAIGQDPVLNKVKLIAEPWDIGPGGYQLGAYPSPFLEWNDKYRDDTREFWRRGSGTFT
RMAERLVGSAPYFDHDGRRANSSLNFVTAHDGFTLQDTVSYNSKHNLANGEDNRDGHSNN
QSDNMGVEGPTDDPAIRAARQQRKRNLITTLMLSQGTPMILAGDELGNSQQGNNNAYCQD
NEIGWVDWSGIDKDFLEFCQQAIVLRKSHPILRQTRFLHSRQRKYDGESDLFWRRADGKL
MQQSDWDNSDLGTLIAELRTAAGSPTYVNRQRALLVVLNRGPAVEVILPGLREGDIWTRS
FDTAHNQSLDGTYIDADSVVVFTNEADAI
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgacagtttctaatatccttgcaggaaaggcatccccattgggtgccaccctagacccc
gatggggtgaactttgccgtgttttcgcgccatgccacaaccgtaactttgtgcctattc
gataacgcggggatcgaggttcgccagattgctttgcctgaaagacaaggtcatgtctgg
catggttacatccccggacttagaaaggggcagcagtacggtttccggatggacggcccg
tataagccagagcaaggtcacaggttcaatcataacaaactgctgattgatccctatgct
aagcaactgaccgggcaccccacgtggaatgatgcgttgttcagttatcaaccgggccac
aagaacaaagacctcagtttcaacaaacaggacagtggaccatatatgccgcgtagcgta
gttgttgatccgtatttcgattgggggacagtgacggccccgggtcatcatttgaaagac
accatagtttacgaggctcatgtcaaagggttgaccgcagggcatccacggattccaaat
cctggaacctatgcggccatggcgtctgatccaatgttggaacacctgaacaaattggga
attacggcggtggagctgttgcctgttcaggctttcatgaacgacaagtttttactggat
cgagggctcacgaattactgggggtacatgacttacggcttttttgcccctgacccgcgt
tacatgaaggggggcgatattgctgagtttcagcaaatggtccgccgttttcattctgct
gatatcgaagtcattctggacgtcgtttacaaccatactgccgaagggtccgaactgggt
ccgacgctgatgttccgtggtttggacaatgccagctattaccgcctacacgaaaacccg
cgctactatactgatgattccggttgcgggaacacgctggattttgaaaacccgtttgtc
atccgtcttgtgatggacagcttgcggtactgggtcgaagtcatgaaggtcgatggtttc
cggtttgatttgtgttccaccctgggacgcaccgcacgcgggtttgaacgcgatggcccg
ttttttcgtgccatcgggcaggaccctgtgctcaacaaggtcaagttgattgctgaaccg
tgggacattggtccgggcgggtatcaattgggggcctatccgtcgccgtttttggaatgg
aatgataaataccgcgacgacacccgagaattttggcgcaggggcagtggtacgtttacg
cgtatggctgaacgtttggtaggatctgcaccctattttgaccatgatgggcggcgcgcg
aacagttcattgaactttgtgactgctcacgatggattcacgctgcaagatacggtcagc
tataatagcaaacataatctggccaacggcgaagacaaccgcgatggccattccaacaac
cagtcggacaatatgggcgttgaaggaccgactgatgatcccgccatccgtgcggcccgt
caacagcgcaagcgaaacctgatcacgacacttatgctgtcgcaaggcacgccgatgatc
ttggccggtgacgagttggggaattcgcagcagggtaacaataatgcctattgccaggac
aatgaaatcggctgggttgattggtcgggcatcgacaaagattttttggagttctgccag
caggctattgttttacgcaagtcacacccgatcctgcgccagacgcggttcctgcattca
cgtcaacgcaaatatgatggagaatccgatctgttctggcgacgcgctgatggaaaacta
atgcagcaatcagattgggacaattctgatctaggaactttgattgcggaactccgcacc
gctgcaggatcgccgacttacgtaaatcgccaacgtgcattgctggtcgttctgaaccgt
ggccctgcggttgaagtgatcctgccgggtttgcgtgaaggggatatctggacgcgtagt
tttgatactgcgcacaatcagtccttagacggcacgtatattgatgcggacagcgttgtc
gtgtttaccaatgaggccgacgccatataa
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