Planktomarina temperata: RCA23_c08310
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Entry
RCA23_c08310 CDS
T03229
Name
(GenBank) putative transporter, permease protein
KO
K01998
branched-chain amino acid transport system permease protein
Organism
ptp
Planktomarina temperata
Pathway
ptp02010
ABC transporters
ptp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RCA23_c08310
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RCA23_c08310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c08310
Transporters [BR:
ptp02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RCA23_c08310
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
MBL_MAP1B
Motif
Other DBs
NCBI-ProteinID:
AII86387
UniProt:
A0AAN0RHS8
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All DBs
Position
complement(887931..888863)
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AA seq
310 aa
AA seq
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MKASTVQELIIAAILAFLAALWPLVVDIYWLGIGVDVMMYVALATSWVLFSGPTHYISLA
TAAFFGIGGFLVGSGMSDYEASFWSMAAFSACVGAVLAALIGLATLRLSGVYFVIFTLGL
AEMIRNLVSWIQNNFLGSRGLYVFTDFTDKHLYWMLLGVAVAVYLLGWIISRSRLGFALR
IIGGDETVARHVGIDTATVKVILFTTTGFFAALVGAIIAPRWSYIEPNQVFSPQLSFFVV
IMALLGGAGRLWGPVVGVIPFLLIWNWVDTNFPNQSILVLGIAFLVIVYFLPHGVVGRLE
QLRIWSRTLK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcctcaactgttcaagaattgatcattgcagcaatccttgcgtttttagcagcg
ctttggcccttagttgtggatatttattggctgggcattggcgttgatgtcatgatgtat
gtcgcgctggccacatcctgggtcctcttttccgggccaacacattacatcagcctcgca
acagccgcttttttcggcattggcggttttttggtgggctcaggcatgagtgactatgag
gccagtttttggtccatggcggctttttcggcctgtgttggggcggttttagcggcgttg
attgggctcgccacgctccgcctctccggcgtctactttgtcatcttcaccttgggcttg
gcagaaatgatccgcaatttggtctcctggatccaaaataactttctgggatcacggggt
ctttatgtctttaccgatttcaccgacaaacatctctattggatgctgctgggtgttgcc
gtggcggtctatcttttaggctggatcatcagccgatctcggctgggttttgcacttcga
attattggcggtgatgaaactgtggcgcggcatgtcggcatagatacagccacggtcaag
gtgatcctattcaccacgaccggatttttcgctgcgcttgtcggcgccatcattgcccca
cgctggagctatattgagcccaaccaagtcttctcaccacaattgagcttctttgtggtg
atcatggcacttttgggcggcgcaggccggctttgggggccagttgtcggggtcatcccc
ttcttgctgatttggaactgggtcgacacgaactttcccaaccaatccatattggtgctg
ggcattgcctttttggtgattgtgtatttccttccccatggcgtggttggacggcttgaa
caattgcgcatctggtcgaggactttgaaatga
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