Planktomarina temperata: RCA23_c08330
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Entry
RCA23_c08330 CDS
T03229
Name
(GenBank) putative transporter, periplasmic binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
ptp
Planktomarina temperata
Pathway
ptp02010
ABC transporters
ptp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RCA23_c08330
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RCA23_c08330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c08330
Transporters [BR:
ptp02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RCA23_c08330
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
AII86389
UniProt:
A0AAN0RHQ6
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All DBs
Position
complement(889783..890937)
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AA seq
384 aa
AA seq
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MALFASGVQAADVIKIGAIAPKTGGLAGGAVVTQWPNVELWVNQVNARGGLDVGGKMMQI
ELIEYDDKTNPGEHIKLAQRLATQDKVDFIVAPYGTGFNIATAPIYGKFGYPMIAVSAIT
DKMEELTQRYPNLFFTLGTTTAFVQGVTEILVEQRAAGTIGNEVAMVNVADAFGIELADR
ARELFAAEGFDIVYDKSYPLGTPDLSPVMKGAKESGAKAFIAWSYPPDSFGLAEQAIIED
LDVNVYYSAVATSFPAFSGVYGSKINNVLGAGGTNVDDPAIAAYRAAHSEITGKTADYWA
SANTYAALQILEQAIVGAATLDRDTVTQYIKDNSFDTVMGDLSFKNNFSDTFWSVGQWQD
GVFRGVKGSNVEGAVDVRLKDGWK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggctctctttgcatcgggcgtacaagcggccgatgttataaaaattggcgcaattgca
cccaaaacgggcggtttggccggcggtgcggtggtgacgcaatggcccaatgttgaatta
tgggttaaccaagtcaatgcgcgcggcggtttggatgtcggcggcaaaatgatgcaaatt
gagctgattgaatatgacgataaaaccaatcctggcgaacatatcaaactggctcaacgc
cttgcgacacaagacaaggtcgattttatcgtggcgccctatggcaccggatttaacatt
gcgaccgcgcccatttacggaaaatttggctacccaatgatcgccgtatcagccatcacc
gataaaatggaagagctgacacagcgttatccaaacctgttctttaccctcgggacaaca
acggcattcgtgcagggcgtgaccgaaatcttggtcgagcagcgcgccgcaggcacgatt
ggaaatgaggttgcaatggtcaacgttgccgatgcctttgggattgaattggccgaccgc
gcgcgggaactcttcgcagcagaaggttttgacattgtttatgacaaatcttaccccctg
ggcactccagatctttcaccggttatgaagggcgcgaaagagagcggtgcaaaagccttt
atcgcctggtcctatccacccgacagcttcggtttggccgagcaagcgatcatcgaagat
ttggatgtaaatgtctattattccgccgttgcaacgagttttccagcgtttagcggtgtt
tacggcagcaaaatcaataatgtgcttggagccggcggaaccaatgtagatgatccggca
atcgcagcctatcgcgcagcacattctgagattaccggcaaaactgcggactattgggcc
tctgccaatacctatgcggctttgcaaattttggaacaagcaatcgtcggcgctgcgact
ttggaccgcgacacggtcacgcaatatatcaaggataacagtttcgacacagtgatgggc
gatttgagctttaagaacaatttttccgatacgttttggtcagttggccaatggcaagac
ggcgtatttcgaggcgttaaaggatccaacgtcgaaggtgccgttgatgtccgcctaaaa
gatggctggaaataa
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