Planktomarina temperata: RCA23_c08380
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Entry
RCA23_c08380 CDS
T03229
Name
(GenBank) transcriptional regulator
KO
K11475
GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptp03000
]
RCA23_c08380
Transcription factors [BR:
ptp03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RCA23_c08380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_24
PaaX
CMD
MarR_2
Rrf2
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
AII86394
UniProt:
A0AAN0VHU0
LinkDB
All DBs
Position
895147..895896
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AA seq
249 aa
AA seq
DB search
MVLEAALGSKHLNQTEKALIGLRSMIMAGRFKTGQRLPEIAVSEQLGISRTPLRQAMDRL
VAEGLLDRISTGGCRVARFTKEDIADAIQIRGVIEGTAARMAAERGADPDLLAHAKSILS
QIDTALSESGGIDFDAYVSANRAFHDIIAHLSGSALMIRELDRMAQLPLASPSAFLSDQE
LIPDFQESLKHAQRQHRTILEAIENREGSRAEALAREHARLALMNFNYLTEQKPARARNV
PGLALLTEK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
ttggttttggaggcggcattgggatcaaaacacctcaatcaaacggaaaaagctctgatt
gggctacgatctatgattatggcaggtcgattcaaaaccggtcaacgtctgcctgaaatc
gcggtctctgagcaattgggcatctcgcgcaccccgctgcggcaagccatggatcggctg
gtggcggagggtttgctggatcggatttcgacgggcgggtgccgggtggcgcgctttacc
aaagaagatatcgcggatgcgatccaaatccgcggggtcatcgaaggcacggcggcccgt
atggcggcagagcgcggcgcggatccagatcttctcgcccatgcgaaatccatcctgagc
cagattgacacggccttgagtgaaagcggagggattgattttgacgcctatgtcagtgcc
aatcgggcgtttcatgatattattgcgcatctgtctggcagtgcgctcatgatccgcgaa
ttggaccggatggctcaactgcccttggcgtccccttcggcctttttgagcgatcaggaa
ttgatcccggattttcaggagtccttgaaacatgctcagcggcagcatcgcaccattctt
gaagctattgagaaccgcgaaggcagccgtgcggaggctttggcgcgcgaacacgcgcgt
ctggccttgatgaattttaactatctcaccgaacaaaagccggcccgggcaagaaacgta
cctgggctggctcttcttactgaaaaataa
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