Planktomarina temperata: RCA23_c08570
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Entry
RCA23_c08570 CDS
T03229
Name
(GenBank) HTH-type transcriptional regulator, GntR family
KO
K03710
GntR family transcriptional regulator
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptp03000
]
RCA23_c08570
Transcription factors [BR:
ptp03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RCA23_c08570
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Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_Crp_2
HTH_11
MarR
HTH_36
MarR_2
TrmB
HTH_IclR
RepL
Rrf2
HTH_20
RP-C
HTH_23
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AII86413
UniProt:
A0AAN0RHS7
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Position
914328..915128
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AA seq
266 aa
AA seq
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MRAESVQILPKGTKALRVYLSVRDQITVGDLRDGETLPSEQKLAEAFGVSRVTVRRGLDA
LAQGGFIERRAGSGTKVRARPAVAQRAAMNFNTLMPQLVEMGQKTTARLLSFTYGGAPDF
VSLAMGFKRDIEVQIATRVRLAGNVPFSHLTTYVPAQIAQNYSENDLATTPLFQLLERSG
VQIKEAHQSVSATLAGPEVAKALDVEVGSALLSLRRVVRDVHGDGVEYLAGLYRPDMFRL
EMPLMRVGQGSARHWEPAIGKDEGGI
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctgagtctgttcagatattgccaaaggggaccaaggcgctccgtgtttacctt
tcagtgcgcgatcagattacggtcggtgatctgcgagatggtgaaaccctacccagcgag
cagaaactcgccgaggcttttggtgtcagtcgagtcactgtccgtcgtgggctggacgca
ctggcgcagggaggctttatagagcgccgggctggaagcggaacgaaggttcgcgcgcgc
ccagcagtggcccagcgcgctgccatgaatttcaacacactcatgccgcaactggtcgag
atgggccaaaagacgaccgcgcggctgttatcattcacctacggtggcgcgcccgatttc
gtgtccctcgcgatggggtttaagcgagatatcgaagttcagattgcgacgcgggttcgg
cttgcgggcaatgttccattttctcatttgacaacttatgtgccggctcagattgcgcaa
aactattccgagaatgatctggccacaacgccgctctttcagcttttggagcgaagtggc
gtgcagataaaggaggcgcatcaatccgtaagcgccaccttggccggtcctgaagtcgct
aaggctcttgatgttgaagttggctcggcattgctctcattgcggcgggttgtgcgggat
gtgcatggagacggtgtcgagtacctcgcagggctctacagaccggatatgttccggctc
gaaatgccgctcatgcgtgttgggcagggctccgcgcgccattgggaacctgccattggc
aaggatgagggcggcatatga
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