Planktomarina temperata: RCA23_c08650
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Entry
RCA23_c08650 CDS
T03229
Name
(GenBank) putative HTH-type transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptp03000
]
RCA23_c08650
Transcription factors [BR:
ptp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RCA23_c08650
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Uma2
DUF5976
Motif
Other DBs
NCBI-ProteinID:
AII86421
UniProt:
A0AAN0RHN8
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All DBs
Position
complement(923021..923623)
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AA seq
200 aa
AA seq
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MKKTETRIQKKNHSAIKAAGLKVFAQFGFRGATLDQIAAESGLSKPNILYYFASKEAIYE
ALLAQLLTDWLQPVRDIDPAGDPVEEILKYAKHKLKMSRLYPRESRLYATEIIQGAPRIK
SVLTGELREVVENLALLINHWADAGLIRAIDPYHLIFSIWAMTQHYADFDVQVKAILGER
DHFEDAEQYLEDMLRRMLTV
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacagagacccgtatccagaaaaaaaaccactcagcaatcaaagccgctggg
ctaaaggtctttgcccaatttgggtttcgcggcgcgacattagatcagatcgcagcggag
tctggtctgtcaaaacccaacatcctgtattacttcgcatccaaagaggctatttacgag
gcactattggcccagttattgaccgattggttgcagcctgttcgcgatattgaccccgcc
ggtgaccctgttgaagaaatactgaaatacgccaaacacaaactgaaaatgagccggctc
tacccccgtgaaagtcgcctttacgccactgaaatcatccaaggcgccccgcgaattaaa
tccgttttgaccggtgaactgcgtgaggttgtcgagaacttagcgctgttaattaaccac
tgggcagacgcgggattgattcgtgctatcgatccttatcatctcatcttttcgatctgg
gccatgacgcaacattatgctgactttgatgttcaagtgaaggcgatcttgggagaacga
gatcattttgaggatgccgagcaatatttagaagatatgctacgacgcatgttgactgtt
taa
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