KEGG   Planktomarina temperata: RCA23_c08650
Entry
RCA23_c08650      CDS       T03229                                 
Name
(GenBank) putative HTH-type transcriptional regulator
  KO
K09017  TetR/AcrR family transcriptional regulator
Organism
ptp  Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptp03000]
    RCA23_c08650
Transcription factors [BR:ptp03000]
 Prokaryotic type
  Helix-turn-helix
   TetR/AcrR family
    RCA23_c08650
SSDB
Motif
Pfam: TetR_C_3 TetR_N TetR_C_29 Uma2 DUF5976
Other DBs
NCBI-ProteinID: AII86421
UniProt: A0AAN0RHN8
LinkDB
Position
complement(923021..923623)
AA seq 200 aa
MKKTETRIQKKNHSAIKAAGLKVFAQFGFRGATLDQIAAESGLSKPNILYYFASKEAIYE
ALLAQLLTDWLQPVRDIDPAGDPVEEILKYAKHKLKMSRLYPRESRLYATEIIQGAPRIK
SVLTGELREVVENLALLINHWADAGLIRAIDPYHLIFSIWAMTQHYADFDVQVKAILGER
DHFEDAEQYLEDMLRRMLTV
NT seq 603 nt   +upstreamnt  +downstreamnt
atgaaaaagacagagacccgtatccagaaaaaaaaccactcagcaatcaaagccgctggg
ctaaaggtctttgcccaatttgggtttcgcggcgcgacattagatcagatcgcagcggag
tctggtctgtcaaaacccaacatcctgtattacttcgcatccaaagaggctatttacgag
gcactattggcccagttattgaccgattggttgcagcctgttcgcgatattgaccccgcc
ggtgaccctgttgaagaaatactgaaatacgccaaacacaaactgaaaatgagccggctc
tacccccgtgaaagtcgcctttacgccactgaaatcatccaaggcgccccgcgaattaaa
tccgttttgaccggtgaactgcgtgaggttgtcgagaacttagcgctgttaattaaccac
tgggcagacgcgggattgattcgtgctatcgatccttatcatctcatcttttcgatctgg
gccatgacgcaacattatgctgactttgatgttcaagtgaaggcgatcttgggagaacga
gatcattttgaggatgccgagcaatatttagaagatatgctacgacgcatgttgactgtt
taa

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