Planktomarina temperata: RCA23_c09430
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Entry
RCA23_c09430 CDS
T03229
Name
(GenBank) DNA photolyase, FAD-binding/cryptochrome
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptp03400
]
RCA23_c09430
Enzymes [BR:
ptp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RCA23_c09430
DNA repair and recombination proteins [BR:
ptp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RCA23_c09430
Prokaryotic type
RCA23_c09430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AII86498
UniProt:
A0AAN0RHW8
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Position
1010370..1011587
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AA seq
405 aa
AA seq
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MAQVMTATRAAGQARLEQFSAKMGRDYAQGRNFDRGPAAHQDVSMLSAYIRRRLITEPEV
IATAIKTQGAEASAKFIDEVIWRSYFKGWLEQRPEVWNNYTAGLRQDLAALEGDVGLRQA
VHAAETAQTGLDYFDSWAAELIETGYLHNHARMWFASIWIFTLKLPWRLGADFFLKNLLD
GDPASNTLSWRWVAGLHTRGKPYVAQASNIARFTEERFVPRAQELTQSASGLEALEPDGL
PECNPPRVPNAPQLHLPTAILFTEEDCRIEDFPFRDLICTAAATLAASPLRSPRDVAQLV
VRFEAGALADVAQRSGLAVSATQIGAPSDLARWALQSGAQQIVTPYVPVGPLRDWLARAQ
PELEAAGISLTEWRRDWDAMVWPHATAGFFKVKKQIPKFLRTICA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagtgatgacggcaacccgtgcggcggggcaagcgcggcttgaacagttttcc
gcgaaaatggggcgcgattatgcccaggggcgcaacttcgatcggggaccggctgcgcat
caggatgtgtcgatgctatcagcctatatccgacgccggctcataactgagcccgaggtc
atcgccacggccataaaaacgcaaggcgctgaagcctctgcaaagttcattgatgaggtg
atttggcgcagttattttaaggggtggttggaacagcggcccgaggtgtggaacaactat
accgcggggttgcggcaagacttggccgcgctggagggtgatgtggggctgcgccaagcg
gttcatgccgccgaaacggcgcaaaccgggctggactatttcgacagttgggcagctgag
ctgattgagaccggatatttgcacaaccatgcgcggatgtggtttgcctccatttggatc
ttcacgcttaaattgccatggcgccttggggcagattttttcttgaagaacttgttagac
ggggatccggcctccaataccttgagttggcgctgggtcgcggggctgcacacgcgcggc
aaaccctatgtcgcacaggcgagcaatattgcgcgcttcaccgaagaacgctttgtgccg
cgcgcgcaagagttgacgcagagcgcctctgggctggaggcgcttgaacctgacgggctg
ccagagtgcaatcctccaagggtgccaaatgcgccgcaactgcaccttccaaccgcgatt
ttgtttacggaggaggattgccggatcgaagattttccctttcgagacttgatctgcacc
gctgcggccactttggcggcgagccccctgcgttcgccgcgtgatgtcgcgcagcttgtg
gtgcggttcgaggcgggtgctttggccgatgttgcgcaaagatcgggtcttgctgtctca
gcgacgcagattggcgcgccgtcagatcttgcgcggtgggcgctgcaatcgggcgcgcag
caaattgtgacgccctatgtgcctgttggccccctgcgcgattggcttgcgcgcgcccaa
ccagagctcgaggcggccggcatttccttgacggaatggcggcgcgattgggatgcgatg
gtctggccccatgcgaccgcgggattctttaaggtcaaaaaacaaattccgaagttcttg
cgcacaatttgtgcatga
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