Planktomarina temperata: RCA23_c09780
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Entry
RCA23_c09780 CDS
T03229
Symbol
valS
Name
(GenBank) valyl-tRNA synthase ValS
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RCA23_c09780 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ptp01007
]
RCA23_c09780 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptp03016
]
RCA23_c09780 (valS)
Enzymes [BR:
ptp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
RCA23_c09780 (valS)
Amino acid related enzymes [BR:
ptp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RCA23_c09780 (valS)
Transfer RNA biogenesis [BR:
ptp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RCA23_c09780 (valS)
Prokaryotic type
RCA23_c09780 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1e
tRNA-synt_1_2
RACo_linker
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
AII86532
LinkDB
All DBs
Position
complement(1046755..1049682)
Genome browser
AA seq
975 aa
AA seq
DB search
MAMEKFNAAEAEDRLYKAWEAAGCFTAGANAKPGASSYCIMIPPPNVTGVLHMGHAFNNT
LQDILVRWHRMRGFDTLWQAGTDHAGIATQMVVERQLAERGEPGRVALGREKFLEKVWQW
KEQSGGTIVNQLKRLGASCDWDRTAFTMAGAQGDTRTGHENSPNFHDAVIKVFVEMYNKG
LIYRGKRLVNWDPHFETAISDLEVENIEVAGHMWHFKYPLAGGATYTYVERDEDGNITLQ
EERDYISIATTRPETMLGDGAVAVHPSDERYAPIVGMMCEIPVGPKAQRRLIPIITDEYP
DKDFGSGAVKITGAHDFNDYQVAKRAGIPMYNLMDTKANLRADGQAYAQEAATAQRIANG
EESFDDAKIAAMNMVPDAYRGMDRFEARKKIVDDITREGLAVMTEDTLTDAERQQTTQLV
PLVENKPIMQPFGDRSKVVIEPMLTDQWFVDTDKIVAPALEAVRDGRVKILPESEKKVYF
HWLENIEPWCISRQLWWGHQIPVWFDETGAQYCAATEAEAQAMAGPDASLTRDPDVLDTW
FSSGLWPIGTLGWSGEAEADAQNDMLQRFFPTSDLITGSDILFFWVARMMMMQLAVVDQV
PFNTIYLHGLVRDAKGKKMSKSTGNVVDPLEIIDEFGADALRFTNASMASLGGVLKLDMQ
RIAGYRNFGTKLWNACSFAQFNEAFEHRSCSLPSPDLALNKWIIGEVGRVRVAVDAALDG
YRFNDAASALYGFVWGTLCDRYLELSKPILKGSHSSGDAGRLETQITLAWVLEQSMTLLH
PIMPFITEELWGITAKRSHMLVHQDWPEYGLELVDTAASEEISWAISLIDSIRSARAQMN
VPAGAKVPLVQVTISPAGEAALAANMAQIQQMARITEVTKVSEMPKGAITITAPQATFGL
PLADIIDVAAERMRLEKSMGKLAKELGGLRGRLNNPKFAASAPPEVLAETRANLEAREEE
EAKLSIALARLQEIG
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggccatggaaaaattcaacgcagcagaagctgaagatcgtctttacaaagcctgggag
gcggcgggctgttttacagccggggccaatgccaaacccggagcatcaagctattgcatc
atgatccccccgcccaatgtcacgggtgttttgcatatgggtcatgcctttaacaatact
ttgcaagatatcttggtgcgctggcaccggatgcgcggctttgacaccctgtggcaggct
gggacagaccatgcgggcatcgccacacagatggtcgttgagcggcaattggcagagcgg
ggcgaaccgggccgtgtggccctggggcgtgagaaattcttggaaaaagtctggcaatgg
aaagagcaatcaggcggtacaattgtaaatcagctcaaacgcttgggcgcctcctgcgat
tgggatcgcacagcctttaccatggcaggcgcgcagggtgacacgcgtacgggccatgaa
aacagcccgaatttccacgatgccgtgatcaaagtcttcgttgaaatgtacaacaaaggc
ctgatttaccgaggcaagcgtctggtcaattgggatccacatttcgaaacagctatctca
gatcttgaagtggagaatatcgaagttgccggtcacatgtggcattttaaatatccctta
gccggtggcgcgacatatacctatgtggagagagatgaagacggcaacatcacgttgcaa
gaagagcgcgactatatctccattgccaccacccgcccagagaccatgttgggcgacggt
gcagttgcggtgcatccctccgacgagcgctatgcgccgattgttgggatgatgtgtgaa
attcccgtcgggcccaaagcgcaacggcgcttgattcccatcatcaccgatgagtacccc
gacaaagactttgggtctggcgcggtcaaaatcaccggggcgcatgatttcaacgactat
caagtcgccaaacgcgccggcattccgatgtataatctgatggacacaaaagccaatctg
cgcgccgatggacaggcctatgcgcaagaggcggccaccgcccagcgcatcgccaatggc
gaagagagctttgacgacgccaaaattgccgccatgaatatggtgccggatgcctatcgc
ggcatggatcgttttgaggcgcgcaagaaaattgtcgatgacatcacccgcgaaggtttg
gcggtgatgaccgaagacaccctcaccgatgcagagaggcagcaaaccacccagctggtg
cccttggtggagaataaacccatcatgcagcctttcggcgaccgctccaaagtggtgatt
gagccgatgctgaccgatcaatggtttgttgacacggacaaaatcgtcgcccctgcgctg
gaggcggtgcgtgatggccgggttaaaattctgcccgagtctgaaaagaaagtttatttt
cattggctcgaaaacatcgagccttggtgcatttcaaggcaattgtggtggggccatcaa
atccctgtttggtttgatgagaccggcgcgcaatattgcgccgcgaccgaagcagaggcg
caagccatggccggccccgacgcctctctcacccgtgatcccgatgtgctggacacttgg
ttctcctccggtctttggcctatcggaactttgggctggagcggcgaggctgaggccgat
gcgcaaaacgatatgctgcaaaggtttttccccacctctgatctcatcacgggctctgac
atcttatttttctgggtcgcacggatgatgatgatgcaattggccgtggtcgatcaagtc
cccttcaacaccatctacctgcacgggttggtgcgtgatgccaaggggaagaagatgagc
aaatcaaccggaaatgtcgtcgatccgcttgagattatcgacgaatttggcgccgatgct
ctgcgctttaccaatgcgtcgatggcctctttgggtggggtgctcaagctggatatgcag
cgcattgcgggatatcgaaattttggaacaaagctctggaatgcctgttcttttgcacaa
ttcaatgaggcatttgaacaccgaagctgctcccttccaagtccagatttggcactcaac
aaatggatcattggcgaagttgggcgggtgcgcgtggcggtggatgccgcgctggacggc
tatcgctttaatgatgcggcctctgcgctctacggttttgtctggggcacgttgtgcgat
cgctatctcgaactgtcaaagccaattttaaaaggcagccattccagcggcgacgccggg
cgattggaaacacaaatcacactggcttgggtcttggagcaatccatgaccctactgcat
cccatcatgccctttatcaccgaagagctctggggcatcaccgcaaagcgcagccatatg
ttggtgcatcaagattggccggaatatgggctcgaattggtcgatacggccgccagcgag
gaaatcagctgggccatttcattgattgattccatccgctctgcccgtgcacagatgaat
gtgcctgccggtgcaaaagtgcccttggtgcaagtgacaatcagcccggccggtgaagcg
gctttggcggccaatatggcgcagattcagcaaatggctcggatcaccgaggtgaccaaa
gtgtcagagatgccaaaaggcgccatcaccattacggcgccccaagccaccttcggcctg
cccttggcagatattatcgatgtggcggcggagagaatgcgccttgaaaaaagcatgggg
aaattggcgaaagaactcggcggccttcgcgggcgtttgaacaaccccaaattcgccgcc
tccgcccccccagaggtcttggccgaaacacgcgccaatctcgaagcccgtgaagaggaa
gaggctaaactctctatagcattggcaagattgcaagaaatcggatag
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