Planktomarina temperata: RCA23_c10830
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Entry
RCA23_c10830 CDS
T03229
Symbol
phrB1
Name
(GenBank) deoxyribodipyrimidine photo-lyase PhrB
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptp03400
]
RCA23_c10830 (phrB1)
Enzymes [BR:
ptp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RCA23_c10830 (phrB1)
DNA repair and recombination proteins [BR:
ptp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RCA23_c10830 (phrB1)
Prokaryotic type
RCA23_c10830 (phrB1)
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AII86634
UniProt:
A0AAN0VI14
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All DBs
Position
1160550..1161962
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AA seq
470 aa
AA seq
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MTPTLLWFRRDLRLQDHAALTAALARGGPVIAVFICDAQVETLGSAPKWRLGQGIAALQK
AVADKGNRLILRRGAAIDVIPKLVEETGATAVYWQRSYDPASQARDAEVKAFLSAMGLEA
KSFKGHLLFEPWTVQTKLGGFYKVYTPLWKAVRGREVPEPLPAPTRIPGPETYPSSEALG
AWGLGRAMQRGAAIVERYARVGADLAQERLAEFTSGALRHYGEGRDIPGEDGTSKLAENL
ALGEITPAQCWHAGQAELNRGNPGAEIFLKELVWREFAYHLLHHTPQILTRNWKPAWDAF
PWSEEASSAKFTAWKTGRTGLEFIDAAMRELYVTGTMHNRGRMIVASYLTKHLMTHWRLG
QAWFEDCLIDWDPASNAMGWQWAAGSGPDAAPYFRVFNPETQIEKFDADRRYRKMWIAEG
QANPPASALQYFDAIPRSWGLSAQSAYPAPIVSAKEGREIALSFYKTRDF
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaactttattgtggttccggcgcgacttgcgtctgcaggaccacgcggcgctg
acggccgctcttgcccggggtggcccggtgattgccgtgttcatctgtgatgcgcaggtt
gagaccttaggatcggcgccaaaatggcggttggggcagggtattgcggcccttcaaaag
gccgtcgccgacaaaggcaaccgcttgattttgcggcgcggcgcggcgatagatgtgatc
cccaagcttgtcgaggaaacgggtgcgaccgccgtctattggcagcggtcctatgatcca
gccagccaggcgcgtgatgcggaggtgaaagcgttcctctcggccatggggctcgaggcc
aaaagcttcaaaggccacctgttgttcgaaccttggacggtgcagacaaagctaggtgga
ttttacaaagtttacacgccgctttggaaggctgtgcgcggcagagaggtacccgagccc
ttgccggcgccaacacggattccgggaccagagacctatccgagctcagaggcgctgggc
gcatggggcttgggacgcgctatgcagcgcggcgctgcgatcgtggaacgctacgcgcgg
gttggtgcggatctggcacaggagagattggcggaattcaccagcggcgcgttgcggcac
tatggcgaggggcgggatattcccggtgaagatggcacgtcaaaattagcagaaaatctc
gctctgggggaaattacccccgcgcaatgctggcacgccgggcaagctgaattgaaccgt
ggcaatccgggggcagaaattttcctcaaagaattggtctggcgcgagtttgcctatcac
ttgctgcaccatacaccgcaaatcctgacgcgaaattggaaaccggcttgggatgccttt
ccctggagcgaggaggccagcagcgccaaatttaccgcgtggaaaaccgggcgcacgggg
cttgagtttatcgatgcggcgatgcgcgagctttatgtcacgggcaccatgcacaaccgt
gggcggatgattgtcgcgtcttatttgaccaaacatctcatgacccattggcggcttggg
caggcttggtttgaagattgcttgattgattgggatccggcgagcaacgcgatgggatgg
caatgggcggcgggcagtggcccggatgcggcgccctatttccgcgtgttcaatcccgaa
acccagatcgagaaatttgatgcagatcggcgttaccgcaagatgtggattgcagagggg
caggcaaatccgccggccagcgcgctgcaatattttgacgctatcccaaggtcttggggc
ctgtcggcgcagagtgcctaccctgcgccgatcgtttcagccaaagaggggcgcgaaatc
gccctgtcgttctataaaacccgtgacttctaa
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