Planktomarina temperata: RCA23_c11120
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Entry
RCA23_c11120 CDS
T03229
Name
(GenBank) transcriptional regulator, GntR family
KO
K11475
GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptp03000
]
RCA23_c11120
Transcription factors [BR:
ptp03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RCA23_c11120
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
HTH_27
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AII86662
UniProt:
A0AAN0VI06
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All DBs
Position
1199107..1199895
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AA seq
262 aa
AA seq
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MESIDTELAARIRNDIVLGNYGEEERISEARLCDTHKVSRTPVRLALRMLEHEGLIRRSE
GRGYFVNAPNVNDVLQAVQVRGHLESLAARLMAQSPDRLSTLPILEAAIEEIDRLILVGK
MDHASIRLIQKQNAVFHKTILECCGNDFIGFTCSRISHMPMLEVGAMVFDRQVLSTKEGK
ERSNFRLKLGNSQHKVIFEAIQKGDAVRAEGVMREHSNTMIEYIQVFEKRTKEELTIKDL
IDYSGLSVMRKEHDTTGKEKSL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggaatctattgatacagaacttgcagcgcgaattcgcaatgacatcgtgctcggcaat
tatggtgaagaagaacgcatctccgaggcgcgcttgtgcgatacccacaaggtttctcgc
acgccggtgcgccttgctcttcgtatgttagagcatgaagggctcattcgacgcagcgaa
gggcgcggctattttgttaacgcaccaaatgtaaatgacgtcttgcaagcagtgcaggta
cgcggccacctcgaaagcctcgccgcgcggctcatggcgcaatcgcctgatcgactcagc
acacttcctatcttggaagcggcgattgaagagatcgataggcttattttagtgggcaag
atggatcacgcttcaattcgcttaatacaaaaacagaatgcagtgtttcacaaaacgatt
ttggaatgttgcggcaatgattttatcggctttacgtgtagtcgtatcagtcacatgccg
atgctagaggttggggccatggttttcgatcggcaagttctgtccacaaaggagggcaag
gagaggagcaacttccgccttaaacttggaaattcacaacataaagtgatctttgaggcc
attcaaaagggcgacgctgtgcgagccgaaggcgttatgcgcgagcattcgaacactatg
attgaatacattcaggtttttgaaaagcgcacaaaagaagagcttacaatcaaagatttg
atcgactattctggcctcagtgttatgcgcaaagagcatgacacgactgggaaagaaaaa
tctctgtag
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