Planktomarina temperata: RCA23_c11720
Help
Entry
RCA23_c11720 CDS
T03229
Name
(GenBank) putative bacterial extracellular solute binding protein, family 3
KO
K16953
dimethylpropiothetin dethiomethylase [EC:
4.4.1.3
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00920
Sulfur metabolism
ptp01100
Metabolic pathways
ptp01120
Microbial metabolism in diverse environments
ptp01320
Sulfur cycle
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
RCA23_c11720
Enzymes [BR:
ptp01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.3 dimethylpropiothetin dethiomethylase
RCA23_c11720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DMSP_lyase
Cupin_2
AraC_binding
ARD
Motif
Other DBs
NCBI-ProteinID:
AII86720
UniProt:
A0AAN0RIJ2
LinkDB
All DBs
Position
1270243..1270815
Genome browser
AA seq
190 aa
AA seq
DB search
MKNTVFENALTAARGAYDASPALQRFARWPDDLRYHEKEAQIIPALRQIKRWSNPHPLHT
ATQDISSYGNWKRTYTEEEVGFGFLQDYGYIELYGPDGHYHSLQGRAYIAYWGRGLYYPW
HHHEAEEIYLVISGSGYFESEGQDPALLTSGQTRRHHSNQPHALTLRQEPILALVLWRGD
GMNGLPLMGA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacagtattcgaaaatgcgcttacagcagcacgaggcgcctatgatgcctca
cccgcgcttcaacgcttcgcgcgctggccagatgatttaagatatcatgaaaaagaagcc
caaataatacccgcgttgcgccaaattaaacgttggtccaatcctcatccccttcatacc
gccacgcaagatatatcgtcatatggcaattggaagcgaacctataccgaggaggaggtc
ggctttggctttttgcaagactacggatacatagagctttatggtccagacggccattat
cattcactacagggccgcgcctatatcgcctattgggggcgcgggctttattacccttgg
catcaccacgaagccgaagaaatctatttggtgattagcggctccggttattttgaaagc
gagggacaagaccccgctctgctcacctcagggcaaacgagacgccaccatagcaatcag
ccgcacgcattaacgctgcggcaagagcctattttagcattggttttatggcgaggagat
ggaatgaacggcttgcccttgatgggagcctag
DBGET
integrated database retrieval system
