Planktomarina temperata: RCA23_c12100
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Entry
RCA23_c12100 CDS
T03229
Name
(GenBank) periplasmic binding protein-like protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ptp
Planktomarina temperata
Pathway
ptp02010
ABC transporters
ptp02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RCA23_c12100
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RCA23_c12100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c12100
Transporters [BR:
ptp02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RCA23_c12100
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GFIT
Motif
Pfam:
Peripla_BP_4
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AII86757
UniProt:
A0AAN0VI91
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All DBs
Position
complement(1309085..1310095)
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AA seq
336 aa
AA seq
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MTIFGLGPHGERASPPERVTLLPQDITAARAKKLRVAIVMHTLESDWARHVVQGIIGTLG
ECGAIVIDVVDCNFSSKAQIDALDRLRGDNPDAIISLPVNNTAVTNAHLAVSGAGIKLVL
IDNAPTGMLPGKDYVSLVSADNFGLGEIAAELLSAGLPQGASAGMLAYDSDFFATNEREI
AFSRWMEINRPDVAVKTARFSTIDSAGNEAVQLISDHSEILGLFVVWDTPCVKVISAVSK
RNPDMPITTVDLGQEMTESLAKGVPVIGIAGQRPFQQGEAVAHTTITALLDRPCPDWIAL
PGLTVSRSNVVESYQAIWRKAVSRHILVQLKVLSNK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgacaatatttggacttggaccacacggtgaacgcgcttcgccaccagagcgcgttact
cttttaccacaggacataactgcggcacgtgcaaaaaaattacgcgtcgcaatcgtcatg
cacactcttgaaagcgactgggccaggcatgtcgtacagggcatcattggaacattgggt
gaatgcggtgcgatcgtcattgacgttgtagattgtaacttttcatccaaagcgcaaatt
gatgcattggaccgtttgcggggcgacaatcctgatgcgattatttcgcttcccgtcaat
aatacagccgtcacaaatgcccaccttgcggtctcgggtgcaggcataaaactcgttttg
attgacaatgcccccactgggatgcttccaggcaaagattatgtctctcttgtttcagct
gacaactttgggttgggcgaaattgcagccgagcttctgtctgccggcttaccgcagggc
gcttctgccgggatgctggcttatgattctgatttttttgccacgaatgaacgcgaaatc
gcttttagtcgttggatggagatcaaccgtcctgacgtcgcggtgaaaacagcgaggttc
tcaaccatcgacagcgccggcaacgaagctgtccaactcatcagtgatcactcggaaatt
ttagggctgttcgtagtctgggataccccctgcgttaaggtcatcagtgcagtttcaaaa
cggaacccagatatgcccattacaacggtggatcttgggcaagagatgacagaaagtctt
gcaaaaggagtgcctgtgattgggattgcaggccagcgtccttttcagcaaggtgaggcc
gtcgcccacactacaatcacggcattgcttgaccgcccatgcccagattggattgccttg
cctggcttaactgtctctcgatcaaatgttgttgaaagttatcaggccatctggcgcaaa
gctgtatctcgccacattttggtccaactcaaggtgctgtcaaacaaataa
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