Planktomarina temperata: RCA23_c12870
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Entry
RCA23_c12870 CDS
T03229
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptp03032
]
RCA23_c12870 (gyrA)
03400 DNA repair and recombination proteins [BR:
ptp03400
]
RCA23_c12870 (gyrA)
Enzymes [BR:
ptp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RCA23_c12870 (gyrA)
DNA replication proteins [BR:
ptp03032
]
Prokaryotic type
DNA Topoisomerases
RCA23_c12870 (gyrA)
DNA repair and recombination proteins [BR:
ptp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RCA23_c12870 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AII86833
UniProt:
A0AAN0RIJ0
LinkDB
All DBs
Position
complement(1395344..1398094)
Genome browser
AA seq
916 aa
AA seq
DB search
MTDETLPPESSETPAPTSSAYDGPAISITQEMKTSYLDYAMSVIVSRAIPDLRDGLKPVH
RRILYAMHETNNTHDKPYRKSSRPVAEAMGKYHPHGDGAIYDALVRMAQDFSMSLVLLDG
QGNFGSMDGDKAAAYRYTEVRMEKSAQALLADIDKDTVDFQLNYDGKDTEPTVLPARYPN
MLVNGAGGIAVGMATNIPPHNLGEVVDATLALIEDPDLTSEQLIDYIPGPDFPTGGVMLG
RSGARKAYLEGRGSVINRAKTRFEELRKDRWAIIIEEIPYQVNKAAMIEKIAAEVRDKRI
EGVAHVQDESDRNGVRVVVELKRDATAEVVLNQLFRYTPMQTSFGCNMLALNGGRPEQLT
LRRFLTCFIDFREEVVARRMAFELRKARERSHVLCGLAVAVSNVDEIVATIRASSDAAEA
RLKLMERRWPAAEISDYIRLIDDPTHTMNDDGTYNLSETQARAILELRLQRLTQIGVKEV
TDELAVLAAKIKEYLEILSSRERIMGIISDELREVKDNFAVPRRTEIIEWSGDMMDEDLI
EREEMVVTVTAGGYIKRTALADFRAQKRGGKGLQGMSTKDEDVVTTLFVANTHTQLLFFT
TDGMAYKMKTWRLPLGGRTAKGKAIVNILPIPTGVSVAAIMPVDRDEAEWGDLQIVFATT
QGDVRRNRLSDFTNVRSNGKIAMKLPEGVELVNARICSEDDDVMLTTNSGRAIRFASTDL
RVMNSRASTGVRGIRLTGDDMVVSMSVIRHFEATPEERAAYLKMRRALAGVTDEEAGEDD
VPADPNFSQERYEEMAAVENLILTITRGGSGKLSSSHDYPVRGRGGMGVAAMDKAMRGGP
VVASFPVELVDQIMLVTSTGQSIRCPIDGISFRSRNAGGVRVFNTSRDEQVVSVAYIPDQ
GDGEDTPEESTSEAAS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgaaacactcccccccgagagcagcgaaacaccagctcccacatcctccgcc
tatgacggcccggcgatcagcattacgcaggagatgaaaacctcctatcttgactatgcc
atgagcgtgattgtcagccgtgcaatcccggatctgcgcgatggtctcaagcccgtgcac
cgccggattctctatgcgatgcatgaaaccaataacacccatgacaagccctaccgaaaa
tcctcgcggccggtcgcggaagcgatggggaaataccacccccatggggacggcgcaatc
tatgatgctttggtgcgcatggcgcaggacttctcaatgtccttggtgctgttggacggg
caaggcaattttggctccatggatggcgacaaggctgcggcctatcgctacacagaagtg
cgtatggaaaaatcggcgcaagcgctcttggccgatatcgacaaagatacagttgatttt
cagctcaattatgatggcaaagatacggagcccacagttctgccggcccgctatcccaat
atgctggtcaacggcgctggcgggattgccgtgggcatggccaccaatatccccccccac
aacctgggcgaagtggttgatgcgacattggccttgattgaagatccggatctgacctca
gagcagctgatcgactatatccccgggccggattttcccacaggcggcgtgatgctgggc
cgctcaggcgcccgcaaggcctatctcgaaggtcgcggcagcgtgatcaaccgggccaaa
acccgctttgaagagctgcgcaaagatcgttgggccatcatcattgaagagatcccctat
caggtcaacaaagcggcaatgatcgagaaaattgcagccgaagtgcgtgataaacgcatt
gaaggcgtggcccatgtgcaagatgaatcagatcgtaatggcgtgcgtgtggtggttgag
ctgaaacgcgatgccacggcggaagtggtgttgaaccaattgttccgctacacgccgatg
cagacctcctttggctgtaatatgctggccctgaatggcgggcggcccgaacagctcaca
ctgcggcgctttttaacctgctttatcgatttccgcgaggaagtcgtggcacgccggatg
gcctttgagctgcgcaaggcgcgcgagaggagccatgtgctttgcgggcttgcggtggcg
gtgagcaatgtggatgaaattgttgccaccatccgcgcctcaagcgatgccgcagaggca
cgtctgaaattaatggagcggcgctggccggcggcggaaatttccgattatatccgcctg
attgatgatccaacccatacgatgaacgacgatggcacctacaatctgtcagagacgcag
gcgcgggctattttggagctgcgtttgcagcggttgacacaaatcggcgtcaaagaggtc
accgacgagctggctgttctggccgcgaagatcaaagagtatcttgaaattctgtcttct
cgcgagcggatcatggggatcatttccgatgagctgcgcgaggttaaagacaatttcgcc
gttccgcgccgcaccgagatcattgaatggtccggtgatatgatggacgaagatttgatt
gagcgcgaggaaatggtcgtcacagtcaccgccggcggctatatcaaacgcacggccttg
gccgatttccgggcgcaaaagcgcggcggcaaggggcttcagggtatgtcgaccaaagat
gaagatgtggtcaccacactctttgtggccaatacccatacccagctgttgtttttcaca
accgatggtatggcctataagatgaagacctggcggctgccgctcggagggcgcacggcc
aagggcaaggcgattgtcaatatcttgcctattccgaccggcgtctctgtggctgcgatc
atgcccgttgaccgtgatgaagccgaatggggcgatttgcaaatcgtctttgcaaccaca
caaggcgatgtacgccgcaaccgcctgtctgacttcaccaatgtgcgctcaaatggcaag
atcgccatgaaactgcccgaaggggtggagttggtcaacgcgcggatctgcagcgaagat
gatgatgttatgctcaccaccaacagtggccgagccattcgctttgcctcgaccgatctg
cgggtgatgaactctcgcgcctcaaccggtgtgcgcggtattcgtctcactggcgacgat
atggtcgtctccatgtccgttattcgccattttgaagccacacccgaagagcgcgccgcc
tatctgaagatgcgccgcgctctggcgggcgtgacagatgaggaggccggtgaggacgat
gttccagccgatccgaacttctcgcaagaacgctatgaggaaatggcggcggttgaaaat
ctgatcctgaccattacccgtggcggctctggcaagctgtcgtccagccatgattacccg
gtgcgcgggcgcggcgggatgggcgtggccgcgatggataaggcgatgcgcggcggtcca
gtggtcgccagcttcccggtagagcttgtcgatcaaatcatgctggtgacaagcacaggt
caatcaatccgctgccccattgacggcatttccttccgctcccgcaatgctggcggtgtg
cgggtgttcaatacaagccgcgatgagcaagtggtcagcgtcgcctatatcccagatcaa
ggcgacggcgaagatacgcccgaggaaagcacttccgaggccgcctcttaa
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