Planktomarina temperata: RCA23_c13850
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Entry
RCA23_c13850 CDS
T03229
Name
(GenBank) putative peptidoglycan-binding peptidase
Organism
ptp
Planktomarina temperata
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
LysM
LysM1_NFP_LYK
LysM3_LYK4_5
RnfC_N
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AII86928
UniProt:
A0AAN0RIQ0
LinkDB
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Position
complement(1490932..1492065)
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AA seq
377 aa
AA seq
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MALKFGSKFILSLCAVTALAGCTNSFGLDVRDQFGGILDTTNAAENAVEERPEPDARGVI
TFPSYQVVLARTGDRIGDVAARIGVDADRLGRFNGIPQEAILRYGEVIALPSNMTAVAAD
GAPLTPTVVDISELSDDPSAGPKPAEPKRHRVVDGETVYTISRLYSVSAEDLAKWNSLSL
TTALRPGQYLLIPITQNRPTPVSAPGEGSITPTPPSSTRPQPRGELPSAEAMTTPATADA
TAPVTVPVPVANTGPVTQASQSDARFMRPVSGTIIRSYKKGSNEGVDIGAPEGAAVSAAD
VGTVAAITEDTKGVAIVVIKHADRLLTVYTNVDNLLVKKGDAVTRGQEIAKVRAGTPSFL
HFEVRKGLESVDPDDYI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcacttaaatttggttctaaatttatattatcgctgtgtgcggtcacggcacttgca
ggctgcacaaatagttttggcttggatgtgcgcgatcaattcggcggcattctcgacaca
acaaatgcggccgaaaatgcggtggaggagcgccctgagcctgatgcacgcggggtcatc
acattcccaagctatcaagttgtcctggccagaacaggtgaccgaattggcgatgtcgcc
gcacgcattggcgtcgatgcagatcggttgggccgatttaatggcatcccgcaggaggcg
atcttgcgctatggcgaagtgattgccctgccctcaaatatgacagctgtggcagcagat
ggcgccccgctcaccccaaccgtggtggacattagtgaattgtcagatgatccaagcgcc
ggaccaaagcccgcagagcccaagcgccaccgggtcgttgatggtgaaacggtctataca
atttctcgactctattcggtctctgccgaggatctcgcgaaatggaacagtcttagcctg
accacggcgctgcgccctgggcagtatctgctgatccctatcactcaaaaccgacccact
ccagtcagcgcgccgggcgaaggctcgatcacccccacaccgcccagcagcacccgccca
caaccgcgcggcgaactgccctcagctgaggcgatgacaacgccagcgaccgccgacgcc
acggcgcctgtgaccgtgcctgtgcctgtggccaataccggccccgtaacccaagcctcg
caaagcgacgcccgtttcatgcggccagtcagcggtacgattattcgcagctataagaaa
gggtcaaatgagggcgttgatattggggccccagagggcgcggcggtatctgccgccgat
gtcggcaccgtcgcggccatcaccgaagacacaaagggcgttgctattgttgtcatcaaa
cacgccgacagattgctgacagtctacacaaatgtcgacaacctattggtgaagaaagga
gatgcggtcacgcgcggccaagagatcgccaaggtccgcgcgggaacgccttcatttttg
cactttgaagtgcgcaaaggcctcgaatccgtcgatcccgatgactatatttag
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