Planktomarina temperata: RCA23_c14060
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Entry
RCA23_c14060 CDS
T03229
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit SdhA
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00020
Citrate cycle (TCA cycle)
ptp00190
Oxidative phosphorylation
ptp00650
Butanoate metabolism
ptp00720
Other carbon fixation pathways
ptp01100
Metabolic pathways
ptp01110
Biosynthesis of secondary metabolites
ptp01120
Microbial metabolism in diverse environments
ptp01200
Carbon metabolism
Module
ptp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ptp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ptp_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RCA23_c14060 (sdhA)
00650 Butanoate metabolism
RCA23_c14060 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RCA23_c14060 (sdhA)
00720 Other carbon fixation pathways
RCA23_c14060 (sdhA)
Enzymes [BR:
ptp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RCA23_c14060 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_binding_3
HI0933_like
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AII86949
UniProt:
A0AAN0VIB6
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Position
1510301..1512106
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AA seq
601 aa
AA seq
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MAAYEYEIHDFDVVVVGAGGAGLRATLGMAEQGLRTACVTKVFPTRSHTVAAQGGIAASL
GNMGPDSWQWHMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEAGKIYQR
PFGGHTTEFGEGPPVQRTCAAADRTGHAILHTLYGQSLKNNAEFYIEYFAIDLVMSDDGV
CQGVVCWKLDDGTMHVFNAKTVVLATGGYGRAYFSATSAHTCTGDGGGMVARAGLPLQDM
EFVQFHPTGIYGSGCLITEGARGEGGFLSNSQDERFMERYAPNYKDLAPRDYVSRCMTME
IREGRGVGPEGDHIYLNLSHLQPEALAERLPGISESAKIFAGVDVTKEPIPVLPTVHYNM
GGIPTNFWGEVLNPTAKDPNATVPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAI
RAGKTVDAAAPAAAMNMASVDKAFDRFDGLRHAAGHLPTAELRLEMQKTMQADAAVFRTS
KTLAEGVDKMTTVADKMSDIKVTDRSLVWNSDLMETLELTNLMPNAMATIVGAEARKESR
GAHAHEDFTERDDDNWRVHTIARVDGSKVDLSHRPVITERLTTEEEGGISLAQIAPKVRT
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttatgaatatgaaatccatgattttgatgttgtggtggttggggcgggaggc
gctggattgcgcgccacactcggcatggccgaacagggattgcgcacggcctgtgtcacc
aaagttttcccgacccggtcccatacagtggccgctcagggaggtattgcggcaagtctg
ggcaacatgggccccgacagttggcagtggcatatgtatgacacggtcaaaggctcggac
tggcttggcgatacagatgccatggagtacctcgccagagaagcccccaaggcggtctat
gagctggaacattacggcgtgcctttttcgcgcactgaggctggaaaaatctatcaacgc
ccctttggtggccatacaacagaatttggcgaaggcccgccagtgcagcgcacctgtgcc
gcggccgaccggacaggtcatgcgattttgcatacgctttacggccagtctctgaaaaat
aacgcggaattctacatcgaatatttcgccattgacttggtgatgtcagacgacggtgtt
tgccaaggggtggtgtgctggaagcttgacgatggcacaatgcatgtgttcaacgccaaa
acggtcgtattggccacaggcggctatgggcgtgcctatttcagcgccacttctgcgcat
acctgcaccggagatggcggcggcatggtcgcgcgggcgggtttgccgcttcaagatatg
gagttcgtacagttccatccaaccggcatatatggctcgggctgtttgatcaccgaaggc
gcgcgcggcgagggcggatttctgagcaattcgcaagatgagcgtttcatggagcgctat
gcgccgaactataaggatttggcgccgcgcgattatgtctcgcgctgtatgacgatggaa
attcgcgaagggcgtggtgtggggccggagggggatcacatctacctcaacctcagtcat
ctgcagcccgaagccctggcggagcgcctgccggggatttcagaatctgccaagattttt
gcaggtgttgacgtgaccaaagagcccatccctgttcttccgacggtgcactacaatatg
ggcggtattccaacgaatttctggggcgaagtgttgaacccaacggccaaagatcccaat
gccactgtgcccggtcttatggccgtgggcgaggcgggctgtgcctccgtacatggggcc
aaccgtttgggctcaaactcgctgatagatctggtggtcttcggccgcgctgccgcgatc
cgtgccggcaaaaccgtcgatgcggccgcgccagcggcggcgatgaacatggcttcggtg
gacaaagcctttgaccgctttgatgggctgcgccatgcggcgggacatttgcccaccgca
gagctgcggttagaaatgcaaaaaaccatgcaggcggatgcggcggtgttccggacctcg
aagaccttggcagagggggtcgataagatgactactgtggccgataaaatgagcgatatc
aaagtcacggatcgcagcctggtgtggaattctgatcttatggaaaccctggagctcacc
aatttgatgcccaacgccatggcgaccattgtgggggcagaagcgcgcaaagaaagccgc
ggtgcgcatgcgcatgaggatttcaccgagcgtgacgatgacaattggcgcgtgcatacc
atcgctcgggtggatggatcaaaggttgatttgagccaccggccggtgatcaccgaaagg
ctgaccaccgaagaagaaggcggcatctcgctggcgcagattgcaccgaaagtgagaact
ttctga
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