Planktomarina temperata: RCA23_c15730
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Entry
RCA23_c15730 CDS
T03229
Symbol
dusB
Name
(GenBank) tRNA-dihydrouridine synthase B
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptp03016
]
RCA23_c15730 (dusB)
Transfer RNA biogenesis [BR:
ptp03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
RCA23_c15730 (dusB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
NMO
PEP_mutase
Oxidored_FMN
MR_MLE_C
TMP-TENI
FMN_dh
IGPS
PKMT_2nd
SOR_SNZ
Motif
Other DBs
NCBI-ProteinID:
AII87110
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All DBs
Position
1690934..1691875
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AA seq
313 aa
AA seq
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MAPLAGITDVPFRNLVQSFGAGLVVSEMVASHEMVQKKPGVRERAELGFGIESTSVQIAG
CDAYLMAEAARMIEANGAKIIDINMGCPAKKVTSGQSGSALMRTPDFALELVEAVVQATS
LDVTLKMRLGWDDNSLNAPEIAKRAEAAGVKMITVHGRTRCQFYKGAADWQAIGRVKRAV
SIPVIANGDIVDVTSARQALQQSGADGVMVGRGAQGAPWRLAQIASALYGTPAPKIPRGS
DLAQVILQHHQAIVDFYGGTLGLKNARKHLGWYLDGLNVAPELRQSVLRSFDLAEIRELI
WCAVEMPSAGVAA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ttggcccctctggccggcatcacagatgtgccttttcgcaatttggttcagtcctttggg
gctggtcttgtagtgtccgaaatggtggccagccacgagatggtgcaaaaaaagccaggt
gtgcgcgaaagagcggagcttggttttgggatcgaaagcacctcggtgcaaattgccgga
tgtgacgcctatttgatggccgaagcggcccggatgattgaggccaatggcgcaaaaata
atcgacattaacatgggctgtcctgccaaaaaggtcaccagcggccagtcaggctcggcg
ctcatgcgcacaccagattttgccttggagctggtcgaggcggttgtgcaagccacatcg
ctggacgtcactttgaaaatgcgcctggggtgggatgataacagcctcaacgccccagag
atcgccaaaagggctgaggctgcgggtgtgaaaatgatcacagtgcatgggcggacgcgc
tgccagttttacaaaggcgcagctgattggcaggccattggccgggtgaagcgggctgtg
tccattcccgtcattgccaatggcgatattgtggatgtgacctctgcgcgccaagctttg
cagcaatcgggcgccgatggggtcatggtggggcgcggggcgcagggcgcgccttggcga
ttggcgcaaatcgcgtcagcgctctatggcacgccggcgccaaagatcccccgcggttca
gacctggcacaggtaattttacagcatcatcaggcaatcgtggacttctatgggggcacg
cttgggctgaaaaacgcccgcaagcatttgggttggtatttagatggcttgaatgtggct
cctgagctgcgccagtcggtattgagatcctttgatctggctgaaattcgcgagctgatc
tggtgcgccgtcgagatgccttccgcaggtgtggccgcgtga
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