Planktomarina temperata: RCA23_c16070
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Entry
RCA23_c16070 CDS
T03229
Name
(GenBank) putative HTH-type transcriptional regulator, AraC family
KO
K21826
AraC family transcriptional regulator, glycine betaine-responsive activator
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptp03000
]
RCA23_c16070
Transcription factors [BR:
ptp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RCA23_c16070
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AII87144
UniProt:
A0AAN0VII1
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Position
1728824..1729837
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AA seq
337 aa
AA seq
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MILMDIFDQLVGTIEAPAKPRRFVFVLLEEFTMLCFSAAVESLRIANRMSGRDLYTWVLM
SESGAPVRCSAGIEFVVQHELIDVSRDDTVMICGGVNIKTASSKKIVNWLRRESRRGPLM
AGLCTAGYTLAKAGLLDGKRATIHWENQDSFIEEFEEVELTKSVFVVDGNRITTAGGTLS
IDLMLKLIAQDHGEDLANAVADQLIYSSIRTDQDTQRLSIPTRIGVRHPKLSQVIQKMEQ
NIEEPISPSILARDVNMSTRQLERLFRRYLNRSPKRYYMELRLQKARNLLMQTDMSVINV
ALACGFASPSHFSKCYRAHYDTTPYRERGAQSSRLAQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgatccttatggatatatttgatcaactcgtcggaacgattgaagcccccgccaagcct
cggcgcttcgtgtttgtcctgcttgaagagttcacaatgctgtgcttttcggcagcggtc
gaatctttgcggatcgcgaaccgcatgtcggggcgtgatctttatacatgggttttgatg
tccgaaagtggcgcacctgtgcgctgctcggcagggattgaatttgttgtccagcatgag
ttgattgatgtgtcgcgcgacgacacagttatgatctgcggcggcgtaaacatcaaaacc
gcctcctctaagaaaattgtcaactggctgcgccgcgagtcgcgccgtgggccattgatg
gcggggctttgcacggcgggctatacgctggcgaaagctgggctgctcgacggaaaacgc
gccacgatccattgggaaaatcaggacagttttattgaggagtttgaggaggtcgagctg
acaaaatcggtctttgtcgtggacggcaaccgtattaccaccgccggcggcaccttatcg
attgatctcatgctgaaactgatcgcgcaggatcatggagaggatttggccaatgcggtg
gccgatcagctcatttactcctccattcggaccgatcaagatacccagcgcctttctatc
cccacgcgcattggggtgcgccatccgaaattgagccaagtgatccaaaaaatggaacaa
aatattgaagagccaatcagcccgtcgattttggcccgagatgttaatatgtcgacccgg
cagctagagcgcttgtttcgccgctatcttaaccgctcgccaaagcgttattatatggag
ctgcgtttgcaaaaagcccgcaatttgttgatgcaaacagatatgtcagtgatcaatgtg
gctttggcctgtggctttgcctcgccctcgcatttttcgaaatgctaccgagctcattat
gataccaccccttaccgggaacggggcgcgcaatcgtcgcgcctggcccaataa
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