Planktomarina temperata: RCA23_c16080
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Entry
RCA23_c16080 CDS
T03229
Name
(GenBank) putative amino-acid binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
ptp
Planktomarina temperata
Pathway
ptp02010
ABC transporters
ptp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RCA23_c16080
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RCA23_c16080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c16080
Transporters [BR:
ptp02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RCA23_c16080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
AII87145
UniProt:
A0AAN0VIG2
LinkDB
All DBs
Position
1729969..1731150
Genome browser
AA seq
393 aa
AA seq
DB search
MRKLLLATTAVALSAGAVAAEDIKIGVILGFTGPIESLTPQMGAAAEMAMAEVNASGALL
GGSTVTSVRGDSTCIDAGAATAVAERLITSDGVKGIMGADCSGVTGAILSNVALANGIVM
ISPSATSPALSTAEDNGLFFRTAPSDARQGVVMTDVLLEEGIDTVAVTYTNNDYGKGLAD
SFQAAFEAAGGTVTINAAHEDGKADYSAEIGALAAAGGDRLVVAGYVDQGGSGIVRAALD
SGAFDTFHFPDGMISAKLVENFGSDLDGSSGQVPGTDSAGAGIFAAMAGDDFDGTSPFAA
ESYDATALIVLAMQAAGSSDPAAYKEKVMEVANAPGLKIEPGQLGLALQAVAAGIDIDYE
GATAVELIGGGESAGNYRQVGYEGGAEITVKYR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaactgctgctggccacaacggctgttgcattgtccgcgggtgctgtcgctgcg
gaagacattaaaattggtgttattttggggttcaccggccccattgaatcgctgaccccg
cagatgggcgcggcggcagaaatggccatggcggaagtgaacgccagcggcgcacttctt
ggcggctcgactgtgacctctgtgcgcggcgattccacctgtattgatgcgggcgccgcg
acggctgttgccgagcgtttgatcacctctgatggtgttaaaggcatcatgggcgccgat
tgttctggcgtgacaggtgcgatcttgtcgaacgtggcattggccaatggcatcgtgatg
atttcaccttctgccacatcccctgccctgtccactgcggaagacaacggtctgttcttc
cgcacggcgccctctgatgcgcgccaaggtgtggtgatgacagacgtcttgctggaagaa
ggcatcgacaccgtcgcggtcacctataccaacaatgactatggcaaaggtttggccgat
agtttccaagcggccttcgaagccgctggcggcacagtcaccatcaatgcggcccatgaa
gacggcaaggcggattattctgctgagatcggcgctctggcggcggcgggcggtgaccgt
ttggttgtggcaggttacgttgatcaaggcggctccggcatcgtccgcgccgctttggat
tcgggtgcctttgacacattccatttcccagacggcatgatttccgcgaaattggttgag
aatttcggatcagacctcgatggctccagcggtcaggtgcccggcacagacagtgcaggc
gctggcatctttgcagccatggccggtgatgactttgatggcacttccccatttgccgct
gaatcctatgacgcgaccgctttgattgtcttggccatgcaagcggccggatcttcagat
ccagccgcctataaagaaaaagtcatggaagtggcgaatgcgcctggtttgaaaatcgaa
cctggccagcttggcttggcgctacaggccgttgcggccggaatcgacattgattacgaa
ggcgcaacagccgttgagctgatcggtggcggcgaatcggccggcaactatcgccaggtt
ggctatgagggcggcgctgaaattacggttaaataccgctaa
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