KEGG   Planktomarina temperata: RCA23_c16870
Entry
RCA23_c16870      CDS       T03229                                 
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
ptp  Planktomarina temperata
Pathway
ptp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RCA23_c16870 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptp03400]
    RCA23_c16870 (xthA)
Enzymes [BR:ptp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     RCA23_c16870 (xthA)
DNA repair and recombination proteins [BR:ptp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RCA23_c16870 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AII87222
UniProt: A0AAN0VIQ1
LinkDB
Position
1811876..1812664
AA seq 262 aa
MDLMKIATFNINGIKARIQALTDWLNEAQPDVALLQEIKSVDENFPRAHFEDMGYQVETH
GQKSFNGVAILSKLPLEDISRGLPGDDSDEQARWIEATVIGKRPIRVCGLYLPNGNPAPG
PKYDYKLDWMRRLKTRAEALMAAEEPALMAGDYNIIPQLEDAAKPEAWTQDALFLPQSRA
AFRDVVNLGFTEAFRSLHPAPGHYSFWDYQAGSWQRNNGIRIDHFLLTPSCADLLQACEI
DSAIRGRDKPSDHVPVWITLDA
NT seq 789 nt   +upstreamnt  +downstreamnt
atggatctcatgaaaatagcgacattcaatatcaatgggatcaaagcccgcattcaagcc
ttgaccgattggctgaatgaagcgcaacccgatgtggcgctgctacaagagatcaaatcc
gttgatgagaatttcccgcgcgcgcattttgaggatatgggctatcaggtggaaactcac
ggtcagaaaagcttcaacggcgtggcaatcttgtcgaaattgcctttggaggatatcagc
cgtgggttgccgggcgatgacagtgatgaacaggcccgctggatcgaagctacagtgatc
ggcaaacggcccattcgggtttgcgggctgtatctgccaaatggaaatccggcgcccggc
ccaaaatatgactataaacttgattggatgcggcggttaaaaacccgcgctgaagccttg
atggcggctgaagagcccgctttgatggcgggagattacaatatcattccccagctcgaa
gatgccgcaaagcccgaggcctggactcaagacgcgctgtttttgccgcaatcacgcgcg
gcgtttcgcgatgtggtcaatctggggttcactgaagccttccgaagcctgcatcccgcg
ccgggccattattctttttgggactatcaagcgggaagctggcaacgcaataatgggatc
agaattgaccattttttgctgacacccagctgcgctgatttattgcaggcctgtgaaata
gattcggccattcgcgggagagacaaaccatcagaccatgtgccggtgtggatcacactc
gacgcctaa

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