Planktomarina temperata: RCA23_c16940
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Entry
RCA23_c16940 CDS
T03229
Name
(GenBank) putative ribosomal RNA large subunit methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptp03009
]
RCA23_c16940
Enzymes [BR:
ptp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
RCA23_c16940
Ribosome biogenesis [BR:
ptp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RCA23_c16940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_10
FtsJ
Motif
Other DBs
NCBI-ProteinID:
AII87229
UniProt:
A0AAN0RJG2
LinkDB
All DBs
Position
complement(1817481..1818677)
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AA seq
398 aa
AA seq
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MHSDHPVIRLKPKTNAQRLRHGFPWVYDNELVTDRRTKAIAPGSLAILQDHGQNTLGLFA
VNPNSKIFARKISDDLDCAVDQPWFAQKIAKALALREALYSQPYYRLIHAEADQLPGLII
DRFSDLLVIQPNAAWVDQRLPALVAALSDILKPSSIVVNGAGRARVLEGLDDARYMALGE
MPSDAIEVAMNGAVYFADVAEGQKTGIFYDQRPNHKFVQDLAQGKSVLDVFSHVGGFGLA
AMANGAANVTCVDGSQPALTLASRGALATRAETPFEAIKGDAFDVMGALAGQGKTYELVI
CDPPAFAPQKAAREAGLRAYERVARLASALVAEGGYLTLCSCSNAADIERFRAASIRGIG
RAGRQAQLIYTGGAGPDHPHHMALAESSYLKTLVFRMQ
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtgaccatccggtgatccgattaaagcctaaaaccaacgctcaacgtctgcgg
catgggtttccgtgggtctatgacaatgagttggtcaccgaccgccgcaccaaggccatc
gcgccgggcagtctggcaatcctacaagatcatgggcaaaacacacttgggctgtttgcg
gtcaatccaaattctaaaattttcgcccgcaaaatctccgatgatttggactgcgcggtg
gatcagccatggtttgctcagaagatcgcgaaagccctcgcgctgcgcgaggcgctgtat
agccagccctattatcgtttgatacacgcagaggccgatcagctgcccgggctgatcatt
gaccgtttttctgatcttttggttatccaaccgaatgccgcttgggttgaccagcgcctg
ccggccttggtcgcagctttgagcgatatattgaaaccgagttccattgtcgtgaatggc
gcgggtcgggcgcgagtgctggaaggcttggatgatgcacgctatatggccttgggcgag
atgccctctgacgcgatagaagtggccatgaatggcgcggtgtattttgctgatgtggca
gagggtcagaaaaccgggattttctatgaccagcgaccgaaccacaaatttgtgcaggat
ttagcccagggcaaatctgttttggacgtcttttcccatgtgggtggttttggtttggcg
gccatggccaatggtgcggccaatgtcacttgtgtggatggctcgcaaccggctttaact
ttggccagccgtggtgctttggccacgcgggctgaaacaccctttgaagcgatcaagggc
gatgcgtttgatgtgatgggggcgctggcgggacagggcaaaacctatgagcttgtgatt
tgtgaccctccggccttcgccccgcaaaaagccgcgcgtgaggcaggtttgcgggcctat
gagcgcgtggcgcgtctggccagtgctttggtggcagagggcggctatttgaccctatgc
tcttgctcaaatgcggcggatatcgaacgttttcgtgccgcctccatccgtgggattggc
cgggctgggcggcaggcgcagttgatttataccggcggcgcgggtcccgatcatccccat
cacatggcgctggccgaatcgagctatcttaaaacgctcgtgtttcgtatgcagtga
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