Planktomarina temperata: RCA23_c16950
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Entry
RCA23_c16950 CDS
T03229
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase Edd
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00030
Pentose phosphate pathway
ptp01100
Metabolic pathways
ptp01120
Microbial metabolism in diverse environments
ptp01200
Carbon metabolism
Module
ptp_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
RCA23_c16950 (edd)
Enzymes [BR:
ptp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
RCA23_c16950 (edd)
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GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
AII87230
UniProt:
A0AAN0RJF7
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All DBs
Position
1818800..1820605
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AA seq
601 aa
AA seq
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MPLHPKLADVTQKIVDRSKDSRAAYLAKIARAAKDGPRRAHLSCGNQAHAYAAMGDDKTT
LLQERAPNIGIITAYNDMLSAHQPFETYPEQIKEAARALGATAQVAAGVPAMCDGVTQGQ
PGMELSLFSRDTIALAAAIGLSHNTFDAAVFLGVCDKIVPGLVIAAATFGHLPSVFLPAG
PMPSGISNDEKTEVRKRFADGLCERDELMAAEMASYHGPGTCTFYGTANSNQMLMEFMGL
HLPGASFVPPASDLRGALTAQGTAQVLANTALGGNFIPTAEILDETAWVNGIVGLMATGG
STNLVLHIPAMARAAGVILEPQDFAEISQIVPLLAKVYPNGLADVNHFHAAGGLPYLIDQ
LLNAGLLHEDVMTIMGPGLHNFTRQAVLTEGTVGYAPAPKQSLNDKILRPVSDPFQASGG
LQNLTGNLGSAVVKISAVAEERRFIEAPAAVFHSQDAVKKAFQSGALNRDVIVVVRYQGP
SANGMPELHNLTPFLAILQDRGHQVALITDGRMSGASGKVPAAIHLSPEAADGGPIAQIE
DGDMLRLDAVAGRLETLAENWQERIPAKPDLCDNEIGMGRELFSVFRRTAGAASQGAGVV
I
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcatccgaaactggcagacgttacgcaaaagattgttgatcgctcgaaagac
agccgcgccgcctatctggccaaaatagcgcgtgccgccaaagacgggccccgccgtgca
catctcagctgtggcaaccaagcccatgcctatgcggcaatgggcgatgataaaacaacg
cttctacaagagcgtgcgccaaatatcgggatcatcaccgcctataacgacatgctgtcc
gcacatcagccctttgagacctatcccgagcaaatcaaagaggcggcccgcgcgcttggt
gccaccgcgcaggtggccgccggggtgccggccatgtgtgatggggtcacacaggggcaa
cctggcatggagctcagcctgttttcacgcgatacaattgcactggccgccgccattggc
ctgtcgcacaatacttttgacgcggcggttttcttgggcgtttgtgataagatcgttcct
ggcttggtgatcgcggcggccacctttgggcatctgccctccgtctttctgccagcaggc
cccatgccatcgggcattagcaacgacgagaagactgaagtgcgcaaacgttttgccgac
gggctgtgcgagcgagatgagctcatggccgcagaaatggccagctatcacgggccgggc
acctgtaccttctacggcacggccaattcaaatcaaatgctgatggaatttatggggctg
cacctgcccggcgccagcttcgttccccctgcaagtgatctgcgcggcgcgctcaccgcg
cagggcacggcgcaggtcttggccaacaccgcccttggcggcaacttcatcccaaccgca
gaaattctggacgaaacagcttgggttaacggcattgttggcctgatggccacggggggc
tcgaccaatctcgtgctgcatatccctgccatggcccgcgccgctggggtgatcttagag
ccacaggatttcgccgaaatttcgcagatcgtgccgctcttggccaaggtctatcccaat
gggcttgcggatgtgaaccacttccatgcagccgggggcctgccctatttaatcgatcag
ctgttaaacgctggactgttgcatgaagatgtcatgaccatcatgggtccaggcctgcat
aattttacccgccaagcagttctgaccgagggcacagtgggctatgccccagcaccaaaa
cagagtctcaacgacaaaatattgcggcccgtcagcgatccgttccaagccagtggcggc
ttgcaaaacctaacgggaaatcttggcagcgccgtggtgaaaatctcggctgtggccgaa
gagcggcgctttatcgaagcgccagctgcggtcttccatagtcaagatgctgtgaaaaaa
gcgttccaatctggagccttgaaccgcgatgttattgtcgttgtccgctaccaaggcccc
tcagccaatggcatgccagaactgcacaatctcacgcccttcctggccatcttgcaagac
cggggacatcaggtcgccttgatcacagatgggcgcatgtcgggtgcttcgggcaaggtt
cctgcggccattcacctgtcgccggaggctgccgatggcggaccgattgcccagattgaa
gatggcgatatgctgcgcttggacgctgttgcggggcgactggagacattggctgagaat
tggcaggagcgcatcccggccaaaccagacctctgcgacaatgaaattggcatgggacgc
gaattgttctctgtcttccggcgcacagccggcgcagcgtcgcaaggcgccggcgttgta
atttag
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