Planktomarina temperata: RCA23_c17260
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Entry
RCA23_c17260 CDS
T03229
Symbol
tyrS
Name
(GenBank) tyrosyl-tRNA synthase TyrS
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RCA23_c17260 (tyrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ptp01007
]
RCA23_c17260 (tyrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptp03016
]
RCA23_c17260 (tyrS)
03029 Mitochondrial biogenesis [BR:
ptp03029
]
RCA23_c17260 (tyrS)
Enzymes [BR:
ptp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
RCA23_c17260 (tyrS)
Amino acid related enzymes [BR:
ptp01007
]
Aminoacyl-tRNA synthetase
Class I (A)
RCA23_c17260 (tyrS)
Transfer RNA biogenesis [BR:
ptp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RCA23_c17260 (tyrS)
Prokaryotic type
RCA23_c17260 (tyrS)
Mitochondrial biogenesis [BR:
ptp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RCA23_c17260 (tyrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4_2
TyrRSs_C
S4
Motif
Other DBs
NCBI-ProteinID:
AII87260
UniProt:
A0AAN0RJI1
LinkDB
All DBs
Position
1852202..1853452
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AA seq
416 aa
AA seq
DB search
MTYHPKSEFMAVMMQRGFLADCTDYQGLDDALSRGVTPAYIGFDATAKSLHVGSLIQIMM
LRWVQKTGHKPITLMGGGTTKVGDPSFRADERPLLTEAQIDSNIAGIKKVFESYISYDDG
PTGALMLNNAEWLDSLNYLDFLRDIGRHFSVNRMLSFESVKSRIDREQSLSFLEFNYMIL
QAYDFLELNRRYGCLFQMGGSDQWGNIVNGIDLTRRVLNHEIYGLTSQLMTTSDGKKMGK
SQNGAVWLNADMLSPYEFWQFWRNTTDADTGRFLKLYTELPIEECDRLGALQGSEINSAK
IILANEVTSLLHGPDAAKTAEATARDVFEKGGVGDDLPTLTLTPSDIADGISIVQLLVKS
GLAGSGKEAKRLISEDGAKLNDAPLSDASLVLHARDLAAPIKLSKGKKKHALVQLG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgacatatcaccctaaatcagaattcatggccgtcatgatgcaacgcggatttctggcc
gattgcaccgattaccaaggcctcgatgacgctttgagccgcggggtgacaccggcctat
attggttttgatgcgacggcaaaatcgctgcatgtgggcagtctgatccagattatgatg
ctgcgctgggtgcaaaaaaccgggcataagccgatcaccctcatgggcgggggcacgacc
aaggtgggcgatccctcatttcgcgccgatgaacgccccttgctgacagaggcgcaaatc
gacagcaatatcgccggaatcaaaaaagtcttcgaaagctatatcagctatgatgacggc
ccaaccggcgctttgatgctcaacaatgccgaatggctcgacagtctcaattacttggat
ttcctacgcgacatcggccggcatttttcggtcaatcgcatgttgagttttgaatcggtg
aaatcgcggatcgaccgtgagcaatcattgagctttcttgagttcaactacatgatttta
caggcctatgacttccttgagctgaaccgccgatatggctgtctgtttcaaatgggggga
tctgatcaatggggcaatatcgtcaatgggattgacctcacccgccgggttttgaaccat
gagatctatggcctcacctcacagttgatgaccacatccgacggcaagaagatgggaaaa
tcccaaaatggcgctgtctggctcaatgccgatatgctctcgccctatgagttttggcaa
ttctggcgcaacaccaccgatgcggacacggggcggtttttgaaactctacacagagttg
cccattgaggaatgtgatcgtcttggcgccttgcagggctccgagattaacagcgcaaaa
atcattttggccaatgaggtcacaagtttgctgcatggaccggatgctgcaaagaccgca
gaggctacagcccgcgacgtcttcgaaaaaggcggcgtcggtgatgatttgcccactttg
accctcacgccgtccgatatcgcagatggcatctccatcgttcaacttttggtgaaatcg
ggtttggccggcagtggtaaagaggcgaaacgcttgatctccgaggatggggcaaagtta
aatgacgccccgctcagcgacgccagcctggtgctacacgcgcgcgatcttgcagcgccg
atcaaattatcaaagggcaaaaagaaacacgctttggttcagctgggatga
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