Planktomarina temperata: RCA23_c17560
Help
Entry
RCA23_c17560 CDS
T03229
Symbol
rrmJ
Name
(GenBank) ribosomal RNA large subunit methyltransferase J
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptp03009
]
RCA23_c17560 (rrmJ)
Enzymes [BR:
ptp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
RCA23_c17560 (rrmJ)
Ribosome biogenesis [BR:
ptp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RCA23_c17560 (rrmJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltransf_23
DUF5749
Ig_CFAP65_4th
Motif
Other DBs
NCBI-ProteinID:
AII87290
UniProt:
A0AAN0RJK8
LinkDB
All DBs
Position
complement(1883087..1883797)
Genome browser
AA seq
236 aa
AA seq
DB search
MAKIPGNNSGRGQRDLRVKVKTARGRKLSSTLWLERQLNDPYVKRAQADGYRGRAAYKIL
ELDDKFRFLVPGARVVDLGCAPGGWCQVAVKRINALGTRQGKKIGTILGVDLQEVESIPG
AEIHVLDFMEDDADAKVKAWLDGPADVVMSDMAAASSGHKQTDHLRIIALCEAAAYFAFD
VLTPGGTFVAKVLAGGAEGELQALLKQKFTKVMNMKPPASRSNSSEKFVVATGFRG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattccaggcaataacagtggtcgcggtcagcgggatctgcgcgttaaggtg
aaaacggcgcggggtcggaaactttcctcgacgctgtggctggagcggcagctgaatgat
ccctatgtcaagcgtgcccaagcggatgggtatcgtggacgtgcggcctataaaatcctt
gaacttgatgataaatttcgctttttggtgcccggagcgcgggttgtggatttgggctgt
gcgccgggcggatggtgccaagtggcggtcaaacgcatcaacgcattgggcacgcggcag
ggcaagaagatcggcacgattttgggtgtggatctgcaagaagtggaaagcatcccgggc
gcggaaattcatgtgctggatttcatggaagatgatgcggatgctaaggtgaaagcctgg
cttgatgggcctgctgatgtggtgatgtcggatatggccgcggcctcgtcgggacataag
caaacggaccatctgcgcattattgcactgtgcgaagcggccgcctattttgcctttgac
gtgctgacacctggtggcacttttgtggccaaggttttggccggcggcgcagaaggggag
ctgcaagcgctgctcaagcaaaaatttaccaaagtcatgaatatgaagccgcctgcatca
cgctcgaattcctcagagaaattcgtcgtggccactggatttcgcggttaa
DBGET
integrated database retrieval system
