Planktomarina temperata: RCA23_c17730
Help
Entry
RCA23_c17730 CDS
T03229
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ptp03012
]
RCA23_c17730
Translation factors [BR:
ptp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
RCA23_c17730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ABC_tran_CTD
AAA_18
AAA_29
AAA
RsgA_GTPase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AII87307
UniProt:
A0AAN0VIL6
LinkDB
All DBs
Position
1902629..1904470
Genome browser
AA seq
613 aa
AA seq
DB search
MLKIQDITYAIDGRRLFESASATIPTGHKVGFVGPNGTGKTTLFRIIRGELALESGAIEL
PRRAKIGGVAQEAPANDLSLLDTVLAADVERAALLADTSEDPNRIAEVQTRLADIDAWSA
EGRASAILKGLGFDEAAQKRPCSDFSGGWRMRVALAAVLFSAPDLLLLDEPTNYLDLEGT
IWLEAFLARYPHTVVVISHDRDLLNRAVGGILHLENKQLTFYQGNYDTFAKTRAAKRAVQ
AAAAKKQSAQREHLQSFVDRFKAKASKAKQAQSRVKALERMELITPPEEVAKRVFTFPQP
EELSPPIVAIENGAVGYGGPDILSQLELRIDQDDRIALLGKNGEGKSTLSKLISGRLKTS
AGRLVTHNKLRIGYFAQHQVDELNLDETPLQHLQSERPDHSPARLRAMLSGFGLGPDQVD
TVVARLSGGQKARLSLLLATLDAPHMLILDEPTNHLDIESREALVQALTTYSGAVILVSH
DMHLLSLVADRLWLVSGGRVTPFDQDLAAYRDFLLGGAAPKKSSEKPKIKKPGRELRIAA
RSELKRAEERIEKITVMHEKLQEKLADPKLYEDHNAADLAVWQKKFHEVETALLRAEKLW
LNASETVEKLENV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatccaagatattacctatgccatcgatggccgccgcttgtttgagagcgcc
agtgcaaccattcccaccggccataaagtgggctttgtcggccccaatggcacgggaaag
accacgctttttcgcattatacgcggggaattggcgctggaaagcggcgcgatcgaactg
ccccgtcgggccaagattggcggcgtggcgcaggaggccccggccaatgatctgtcgctg
ctcgacacggttttggccgcagatgtcgagcgggcggcgctcttggccgataccagcgaa
gatcccaacagaatcgccgaggtgcaaacccgtctggccgatattgatgcctggtccgcc
gaagggcgcgcctctgccattctcaaaggtctgggctttgacgaggcggcgcaaaagcgc
ccctgctcggatttctcaggcggctggcggatgcgggtggccttggcggcggtgttgttt
tccgcgccagatcttttgctgctggatgagccgaccaactatctcgatcttgagggcacc
atctggctcgaagcctttttggcgcgctatccgcatacggtggtggtgatcagccacgac
cgcgacttgctcaaccgcgccgtgggcgggatcttgcatcttgagaacaagcaattgacc
ttctaccaaggcaattacgatacattcgccaaaacccgcgccgcaaaacgcgcggtgcaa
gcggccgcggcgaaaaagcaatcagcgcagcgcgagcatttgcaaagttttgtcgatcgc
ttcaaggccaaggcctccaaggccaaacaagcgcaatcgcgcgtcaaggcgctggagcgc
atggagctgatcaccccgccggaggaggtggcaaagcgggtctttaccttcccgcagccc
gaagagctgtccccgcccattgttgcgattgaaaacggcgccgtcggctatggcgggccg
gatatcctatctcagctggagttgcggattgatcaggacgaccgcattgcgcttctgggc
aagaacggtgaaggaaaatcaaccctgtcgaagttgatctctggccgactcaaaacctct
gccgggcggcttgtgacccataacaaattgcgcattggctattttgcccagcatcaggtc
gatgagctgaacctcgacgaaacaccgctgcaacatctgcagtccgaacgccccgatcac
agcccggcccgcctgcgcgccatgctctcgggctttggtctggggcccgatcaggtcgat
acagtggttgcgcgtctctcaggcgggcaaaaggcgcggctatcgctcttgctggccacg
ttggatgcgccgcatatgctgattttggatgagccgacaaaccacctggatatcgaaagc
cgcgaggccttggtgcaagcgctgacaacctattctggcgcggtgattttggtgagccat
gacatgcatcttttatcgctcgtggccgaccgtttgtggttggtctcgggcgggcgggtc
acaccgtttgaccaagatctcgcggcctatcgcgattttcttctcggcggcgccgcgccc
aagaaatcctctgaaaagcccaagatcaaaaagcccggacgcgagttgcggattgcggcc
cgcagcgagctgaaacgcgcagaagagcgtatcgaaaaaatcaccgtgatgcatgaaaaa
ttgcaagaaaagctcgcggatccaaagctctatgaggatcataatgccgccgaccttgcg
gtctggcaaaaaaagtttcatgaagtggagaccgccctgttgcgggccgaaaagctatgg
ctcaacgccagtgaaactgtagagaaattggaaaatgtctga
DBGET
integrated database retrieval system
