Planktomarina temperata: RCA23_c18000
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Entry
RCA23_c18000 CDS
T03229
Symbol
pdhB
Name
(GenBank) pyruvate dehydrogenase E1 component beta subunit PdhB
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00010
Glycolysis / Gluconeogenesis
ptp00020
Citrate cycle (TCA cycle)
ptp00620
Pyruvate metabolism
ptp00785
Lipoic acid metabolism
ptp01100
Metabolic pathways
ptp01110
Biosynthesis of secondary metabolites
ptp01120
Microbial metabolism in diverse environments
ptp01200
Carbon metabolism
ptp01210
2-Oxocarboxylic acid metabolism
Module
ptp_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RCA23_c18000 (pdhB)
00020 Citrate cycle (TCA cycle)
RCA23_c18000 (pdhB)
00620 Pyruvate metabolism
RCA23_c18000 (pdhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RCA23_c18000 (pdhB)
Enzymes [BR:
ptp01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
RCA23_c18000 (pdhB)
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
Biotin_lipoyl_2
Transketolase_C_1
PFOR_II
ATP-synt_ab_Xtn
Motif
Other DBs
NCBI-ProteinID:
AII87334
UniProt:
A0AAN0RJN7
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All DBs
Position
1929493..1930863
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AA seq
456 aa
AA seq
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MAIEILMPALSPTMEEGTLAKWLVAEGDKVSSGDILAEIETDKATMEFEAVDEGVIGKLL
IAEGTANVTVNSAIAVLLDEGESLSDAASPAPAAAPAASAAQPAASAPAASAQAPVAVQV
VEPDLPAGTTFKSLTVREAIREAMSEEMRSDETVFLMGEEVAEYQGAYKISQGMLDEFGP
KRVIDTPITEHGFAGIAVGAAFGGLKPVVEFMTFNFAMQAMDHIINSAAKTLYMSGGQMG
APMVFRGPNGAAARVGAQHSQDYAAWYAHIPGLKVVMPYSADDAKGLLKSAIRDPNPVIF
LENEILYGQSFQVPDLPDYTVPLGKARIWREGNDITLVSFGIGMKYALEAADQLAEMGVS
AEVIDLRCLRPLDTETVVNSVKKTNRCVTIEEGFPVCSIGSHISSVLMQEAFDYLDAPVM
TCTGKDVPMPYAANLEKLALVTTAEVMTAAKSVLYR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgaaatcttgatgcccgcactgtctcccaccatggaagaaggcaccttggcc
aaatggctggttgccgaaggtgataaagtcagctccggcgatattctggccgaaattgaa
accgacaaagccacaatggaatttgaggcggtcgatgagggggtcattggcaaactgttg
atcgcggaagggacggccaatgtgactgtaaactctgccattgccgttttgctggacgag
ggcgagagcctgtccgatgcagcctctcctgccccagcagcggccccagcggccagcgcg
gctcagccggcggcctcagcgcccgctgcatctgcacaagccccggttgccgtgcaagtc
gttgagcctgatttgccggctggcacgacatttaaaagtctcaccgtgcgtgaggccatt
cgcgaggccatgtccgaagagatgcgctctgatgaaacggtctttctcatgggggaagag
gtggccgaataccaaggcgcctataagatctcgcagggtatgcttgatgagtttggccca
aagcgggtgattgatacgccaattaccgaacatgggtttgccggtattgcggttggtgcc
gcttttggcgggctcaagcccgtggtcgaattcatgacgtttaacttcgccatgcaggcg
atggatcatatcatcaactcggcagccaagaccctctatatgtctggtggtcaaatgggc
gcgcccatggtgtttcgtggccccaatggggccgccgcccgcgttggcgcgcagcacagc
caggactatgcggcctggtatgcccatattcccgggctcaaagttgtgatgccctattcg
gcagatgacgccaaaggcctgctcaaatcagccattcgtgatccaaacccggtgatcttt
ttggagaatgaaattctctatggccagagcttccaagtcccagatttgcccgattacacc
gtacctcttggcaaagcgcgcatctggcgcgaaggcaatgacatcacattggtcagcttc
ggcatcggcatgaaatatgcgctggaagcggcagatcaactggccgagatgggcgtgagt
gcggaagtcatcgacctgcgctgtttgcgtcccttggacacagagacggtcgtgaattct
gtaaaaaagaccaatcgctgcgtcacaatcgaagagggatttccagtctgctccatcggc
agccatatctcctcagttctcatgcaggaggcttttgactacctcgacgcccccgttatg
acctgcacaggcaaggatgttcccatgccctatgcggccaatcttgagaaacttgccctg
gtcaccaccgctgaggtgatgacggcggccaaatctgtcctctaccgttaa
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