Planktomarina temperata: RCA23_c18410
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Entry
RCA23_c18410 CDS
T03229
Name
(GenBank) putative quinoprotein
KO
K17713
outer membrane protein assembly factor BamB
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c18410
Transporters [BR:
ptp02000
]
Other transporters
Pores ion channels [TC:
1
]
RCA23_c18410
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PQQ_2
PQQ
Beta-prop_ACSF4
Beta-prop_EMC1_N
DUF5074
Motif
Other DBs
NCBI-ProteinID:
AII87372
UniProt:
A0AAN0VIU9
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All DBs
Position
complement(1968790..1970103)
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AA seq
437 aa
AA seq
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MGLKAVLYIGLLGLGVGCSNSDPRLQGERELLDGTVFVETDARFLAEDLPDLRLPSPQPV
PAWTHQGGNAQHIAAHAELPSELTLSWSRRIGAGDGKRHQISAAPVAQGGQVYTLDSQSM
VTAIDETGTILWQSELGKLSDALKDASGGGLAVGGTQLFVTTGFGTVVALDTASGAELWT
QDLASYGGASPTVYDDLLYIAARDGAAWAIDTSNGRIKWQVAGPTVAASHTGGPGPAVSD
KYAVFPFGTGDVLASFRKGGLRSWSSGLSGARLGLASTQVRDLTGQPVIEGSSVYLASSA
GRMAAVDLNTGMRIWTAKQGSQGHILVAGGAVFAVSDAGNLIRLSKDDGALIWSTPLPKF
TKKSVKSRAKIHAHYGPILAGGRLILASSDGLIRQFNPADGTLITTVDLPSGAASAPIVV
NGTLYVLSTKGDLLAFR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgggactaaaagcggtgctctatatcggacttttgggtttgggcgtagggtgttccaat
agcgatccgcgtttgcaaggggagcgtgaattgcttgatggcacggtttttgtggaaacc
gacgcgcgctttttggcggaagatttgcccgatctgcgattgccgagcccacagcctgtg
ccggcttggacccatcaaggcggcaacgcccagcacatcgccgcacatgcagagcttccc
tcagagttgacattgagctggtcgcgccggattggtgcgggagacggcaaaagacatcaa
atttccgccgcgcccgtcgcgcagggcggtcaagtttacacacttgacagccaatctatg
gtcacagcgattgatgagaccggcactattttgtggcagagcgaacttggaaaattatct
gatgccttaaaagatgcctccggtggcgggctggccgtaggcggcacgcagctgtttgtg
accacaggctttgggacggttgtggctttagacaccgcctccggtgctgagctttggacg
caggatctggcaagctatggcggcgcctctccgacggtctatgatgatttactttatata
gcggcccgcgatggcgcggcctgggccattgacacctccaatggtcgaataaaatggcaa
gtcgccggtcccacggttgcggccagtcacaccggcgggcctggaccagccgtgtctgac
aaatatgcggtttttcccttcggcacgggcgatgtattggcctccttccgaaagggcggt
ttgcggtcctggagctcgggtctttcgggcgcgcgcttgggcctggcctcaactcaggtg
cgcgatctgacaggacagccggtcattgagggttcatctgtctatctggccagttccgcg
ggccgtatggcggcggtcgatttgaacactggcatgcggatttggacggccaagcagggg
agccaagggcatatcctcgttgctggcggcgctgtttttgcggttagcgatgccggcaat
ttgatccgcctgtccaaagatgatggtgcgttgatctggtcgacacccttgccaaagttc
acgaagaagagcgttaaatctcgtgcgaaaatccatgctcattacggcccaatcttggcc
ggggggcggttgatcttagcatcatctgatgggctgatccggcagttcaacccggcagat
ggcacgttaatcacgactgttgacttgccgagcggtgcggccagtgctccaattgtggtg
aatggcacgctctacgttttgagcaccaaaggtgatctactggctttccgttaa
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