Planktomarina temperata: RCA23_c18940
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Entry
RCA23_c18940 CDS
T03229
Symbol
potD
Name
(GenBank) ABC transporter, spermidine/putrescine import, substrate binding protein PotD
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ptp
Planktomarina temperata
Pathway
ptp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RCA23_c18940 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c18940 (potD)
Transporters [BR:
ptp02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RCA23_c18940 (potD)
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Motif
Pfam:
SBP_bac_8
SBP_bac_1
PNP_phzG_C
Motif
Other DBs
NCBI-ProteinID:
AII87425
UniProt:
A0AAN0RJU4
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Position
complement(2031745..2032842)
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AA seq
365 aa
AA seq
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MIMKKTTLLLTGTALALGATSAFAGSHTGSITAVSWGGAYTKSQIEAYHKPWTAATGNTV
VSEDYSGGIAEVKAQVEAGNVTWDIIDVEKSDAVRGCDEGLFMEIDPASLPAGADGTPAE
EDFVDGSFTDCAVANIVWSTIFAYDKSAMPNGPKTIADFFDTSKFPGKRGLRKSPKATLE
MALAADGVAPEDVYEVLGTDAGVDRAFAKLDTIKNDVVWWEAGAQPPQLLADGEVAMTTA
YNGRIFNAVASENKPFEIVWDAQVFDFDMWAIVKGAPNADLAMDFLKFSTETAQLAAQAS
YISYGPARKSSAPLVSTYHSNPDLDMGPQMPTAPANFATAIPNDFEFWADNADELNERFN
AWLIN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgattatgaaaaagacaactctacttttgaccggaaccgctctggcgcttggcgccacc
agcgcgtttgccggtagccacacaggcagtatcacagcggtatcttggggtggcgcttac
accaaatcacaaatcgaagcctatcataagccttggactgcggcgaccggtaacaccgtt
gtatcagaagactattctggcggtattgcagaggtgaaagcacaggttgaagcgggcaat
gtgacctgggacatcatcgatgttgaaaagtccgatgcggtgcgtggctgtgatgaaggc
ctgttcatggaaattgacccggcctctttgccagcgggcgcggacggaacgcctgctgag
gaagactttgtcgatggctctttcaccgattgtgctgtggcaaacatcgtttggtccact
attttcgcctatgacaaatctgccatgccaaacggcccgaaaacaatcgcagatttcttc
gacacatctaaattcccaggcaaacgtggcctgcgcaaatctccaaaagcaacgcttgaa
atggcattggctgcggatggtgtggctcctgaagacgtctatgaagttttgggcacagat
gcaggcgtagaccgtgcatttgcaaaactcgacaccatcaagaatgatgttgtttggtgg
gaagcgggcgcacagccaccacaattgctggcagatggcgaagttgcgatgaccacagcc
tataacggccgtattttcaatgctgttgcctccgaaaacaagccgtttgagattgtctgg
gacgcgcaggtgtttgacttcgacatgtgggcgattgtgaaaggtgctccaaatgcagat
cttgcgatggacttcttgaagttctccactgagactgcgcaattggcagcacaagcgtcc
tacatctcctatggtcctgcacgtaaatcatcggcaccgctggtgagcacataccatagc
aatccagatctggatatgggtccgcaaatgccaacggcgcctgcgaactttgcaacagct
attccgaatgactttgaattctgggctgacaatgcagatgagctcaacgagcgtttcaac
gcttggttgatcaactaa
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