Planktomarina temperata: RCA23_c19030
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Entry
RCA23_c19030 CDS
T03229
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00071
Fatty acid degradation
ptp00362
Benzoate degradation
ptp00650
Butanoate metabolism
ptp01100
Metabolic pathways
ptp01120
Microbial metabolism in diverse environments
ptp01200
Carbon metabolism
ptp01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RCA23_c19030
09103 Lipid metabolism
00071 Fatty acid degradation
RCA23_c19030
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RCA23_c19030
Enzymes [BR:
ptp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RCA23_c19030
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
Pyr_redox
Pyr_redox_2
NAD_binding_7
NAD_binding_8
F420_oxidored
FAD_binding_3
NAD_binding_2
ApbA
AlaDh_PNT_C
Sacchrp_dh_NADP
Pyr_redox_3
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AII87434
UniProt:
A0AAN0RJP9
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All DBs
Position
complement(2041045..2043111)
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AA seq
688 aa
AA seq
DB search
MQVTMRSENHVGYVTLSNPPVNAIGQALRQGLLEAVRWAERDRLDRVIVFGAGGVFAAGA
DAKEFDSPPQVPHLPEVLNAIDESFVPWIAAIEGVALGGGAEIAMACRMRIMAPDARIGL
PEVTLGVIPGAGGTARLPRLVGLQKAVEMITMGKPIGAQEARSAGLVHAVEDDPIEAAFM
VNSEELGCIVPTWEFHAPAHDPDLFHMARENLKAKMAGQEAPLRALEVIEAGLSLPFHQA
LTQERQVFLELKTGPQAKALRHIFFAQRAAKAPAHLRGVALEVRHAVVVGGGTMGAGIAY
ALLAAGLQVTVLEADAAGLQRAEDTIGKLTEASLRRGIIDAAQAADQRRRMTLSTQYSEA
ASAQLAIEAVFEDMAVKHEILAKLEAVMPADAVLATNTSYLDVNEMAARLMDPTRVIGLH
FFAPAHIMKLLEIVQGAQSSDRAISTGYALAKRLGKVPVLAGVCDGFIGNRILARYREAA
DTVFMDGSTPWDVDEAMVDFGYAMGPYEAQDLSGLDIAHANRQRQAPTRDPNRRYIPIAD
RMIELGKLGRKTGAGWYRYPGGGGKVEDPIVADLAIEEAHFAGMSRTDYSGPEICRRLLL
AMINEAADILDAGIAQSASDIDLVTVFGYGFPRWRGGLMDYADSLGVKAIVAQLEILARE
DPVAWKVSPLLRRCAEAGQSLAEARPKL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgaccatgcgcagtgaaaatcatgttggctatgtaaccttgagcaatccaccg
gtgaacgccattggccaagccctccgccaaggtctgcttgaggcggtgcgctgggcggag
cgggacaggttggaccgggtcattgtctttggtgccgggggcgttttcgcagcgggcgca
gacgcaaaggaatttgacagcccaccgcaagtgccgcatctgccggaggttttgaatgcg
attgatgaaagcttcgtgccgtggattgccgcaattgagggcgtggccttggggggcggc
gctgaaattgccatggcctgccgcatgcgcattatggcgcctgatgcgcgcattggcctg
ccggaggtgacgttgggggttatccctggagccggtggcaccgcgcgcctgccgcgtctg
gtcgggctgcaaaaagccgttgagatgatcaccatgggcaagcccattggggcgcaagag
gcccgctcggcgggattggtccatgcggtggaggacgatcccattgaggctgccttcatg
gtcaacagcgaagagctgggctgcattgtgcccacatgggaatttcatgcccccgcgcat
gacccggatctgttccacatggcgcgtgaaaatctaaaagcaaaaatggctgggcaagag
gcgcctttgcgggcgcttgaggtgatcgaggcagggctgtctttgccatttcaccaggct
ttgacgcaggaacgccaggtgtttttggagctgaagaccgggccacaagccaaggcgttg
agacatattttctttgcgcagcgcgccgcgaaagcaccagcgcatttaagaggcgtggcg
ttggaggtgcggcacgcggtggtggttggtggcggcacgatgggcgccgggattgcctat
gcgcttttggcagcgggcctgcaggtcacggtattggaggcagatgccgccgggctgcaa
cgggctgaagacacgatcggcaaacttaccgaggccagcttaagacggggtatcatagat
gccgctcaggccgccgatcagcgccgccggatgacgctgagcacgcaatatagcgaagcg
gcctctgcgcaattggctattgaggcggtgtttgaagatatggcggtgaaacacgaaatt
ttagccaaattggaagctgtgatgccagcggatgccgtgctggccaccaatacgtcttat
ctggatgtgaatgagatggccgcgcggcttatggatcccacgcgtgtcatcggcctgcat
ttcttcgcaccggcccatatcatgaaattgttggaaattgttcaaggggcacagagcagc
gatcgtgcgatttccacggggtatgctttggcaaaacgcctgggcaaggttccggttttg
gccggggtctgtgatgggtttatcggcaatcgcattttagcgcgctatcgtgaggcggcc
gatacggtgttcatggatggttcaaccccttgggacgtggatgaggccatggtagatttt
ggctatgccatgggaccctatgaagcccaggatctctcgggcttggatatcgcccatgcc
aatcggcaacgtcaggcgccgactcgcgatccaaacaggcgctatatccccattgccgat
cgcatgattgagctggggaaattgggccgcaagacaggtgcaggttggtatcgctacccc
gggggtgggggcaaggtggaggatccaatcgtggcggatctggccatagaggaggcgcat
tttgccggaatgtctcgcacggattattctgggccagagatctgccgaaggcttttactg
gccatgatcaatgaggcagctgatattttggacgcgggcattgcgcaatcggccagtgac
atcgatctggtaacggtttttggctacggcttcccgcgctggcgcggcgggctgatggat
tatgcagacagtcttggggtgaaggcaatcgtggcgcagcttgagattttggcgcgggag
gatcctgtggcttggaaggtctcaccgctgctccgccgctgcgcagaggccgggcaatcc
ttggcagaagcccggccgaagctgtga
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